RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 COX6A1P12074 109 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 CLDN15P56746 228 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 HERPUD1Q15011 391 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 HLA-BQ31612 363 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 LGI3Q8N145 548 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 GALNT14Q96FL9 552 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 ZNF286AQ9HBT8 521 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 SH2D2AQ9NP31 389 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 CCL28Q9NRJ3 127 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 A0A1W2PR80 420 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 MPPED1O15442 326 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 IGHV2-5P01817 119 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 GPM6AP51674 278 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 FAM189A2Q15884 450 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 NEK7Q8TDX7 302 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 MOB3AQ96BX8 217 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 RAB39BQ96DA2 213 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 DOCK11Q5JSL3 2073 aa9.1□□□□□ -0.95
SMC3-201ENST00000361804 KLF7O75840 302 aaPredicted RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 HLA-HP01893 362 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 TCN2P20062 427 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 HOXA4Q00056 320 aaPredicted RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 TMEM267Q0VDI3 215 aaPredicted RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 ZNF503-AS2A6NEH8 195 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 ARGFXA6NJG6 315 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 H3BQ15 152 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 EPHA8P29322 1005 aaPredicted RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 NKX2-1P43699 371 aaPredicted RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 NDUFA6P56556 154 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 ERVFRD-1P60508 538 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 MRPS34P82930 218 aaKnown RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 MALLQ13021 153 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 GNMTQ14749 295 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 C20orf204Q6ZNR8 217 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 AAED1Q7RTV5 226 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 PRR18Q8N4B5 295 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 TCEAL3Q969E4 200 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 BCO1Q9HAY6 547 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 PINLYPA6NC86 204 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 LILRA1O75019 489 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 PDCD6O75340 191 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 LY86O95711 162 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 RBM11P57052 281 aaKnown RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 RAB35Q15286 201 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 SPNS3Q6ZMD2 512 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 ZNF695Q8IW36 515 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 CARFQ8N187 725 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 TMEM252Q8N6L7 170 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 OR51H1Q8NH63 302 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 Q8WTZ3 238 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 EXTL1Q92935 676 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 SPSB1Q96BD6 273 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 SEBOXQ9HB31 216 aaPredicted RBP9.09□□□□□ -0.95
SMC3-201ENST00000361804 FAM86C1Q9NVL1 165 aa9.09□□□□□ -0.95
SMC3-201ENST00000361804 IGKV1-6A0A0C4DH72 117 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 hCG_38984A0A1B0GV85 526 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 LOC102725191A0A1B0GVB3 256 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 PPIHO43447 177 aaKnown RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 EIF1BO60739 113 aaKnown RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 HAAOP46952 286 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 SSR4P51571 173 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 DSCR4P56555 118 aaPredicted RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 CARD18P57730 90 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 KIAA0141Q14154 515 aaPredicted RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 RPS19BP1Q86WX3 136 aaKnown RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 OR56B2PQ8NGI1 322 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 FOXB1Q99853 325 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 VSIRQ9H7M9 311 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 C19orf25Q9UFG5 118 aaPredicted RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 POMT1Q9Y6A1 747 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 TAGLN2P37802 199 aaKnown RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 CNN3Q15417 329 aaKnown RBP9.08□□□□□ -0.96
SMC3-201ENST00000361804 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 IMMP1LQ96LU5 166 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 ZNF251Q9BRH9 671 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 SUCNR1Q9BXA5 334 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 OR2H1Q9GZK4 316 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 DEPPQ9NTK1 212 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 HS3ST1O14792 307 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 CHST1O43916 411 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 DTYMKP23919 212 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 LMO1P25800 156 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 PMS2CLQ68D20 193 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 GGNQ86UU5 652 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 MED12LQ86YW9 2145 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 GPR137CQ8N3F9 429 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 OR1J1Q8NGS3 322 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 OR10D3Q8NH80 312 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 RSG1Q9BU20 258 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 ANGPTL4Q9BY76 406 aa9.08□□□□□ -0.96
SMC3-201ENST00000361804 WRBO00258 174 aa9.07□□□□□ -0.96
SMC3-201ENST00000361804 NGFP01138 241 aa9.07□□□□□ -0.96
SMC3-201ENST00000361804 CFIP05156 583 aa9.07□□□□□ -0.96
SMC3-201ENST00000361804 SMIM6P0DI80 62 aa9.07□□□□□ -0.96
SMC3-201ENST00000361804 OTX2P32243 289 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms