RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PPP1R1AQ13522 171 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 MIDNQ504T8 468 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 MRM1Q6IN84 353 aaKnown RBP17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 YIPF6Q96EC8 236 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 CHRDL1Q9BU40 450 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 SIRT7Q9NRC8 400 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 CLDN14O95500 239 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 CD37P11049 281 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 ZNF485Q8NCK3 441 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 IL22RA2Q969J5 263 aa17.78■□□□□ 0.44
CDC42BPB-201ENST00000361246 FOXS1O43638 330 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 FUCA1P04066 466 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 SPICQ8N5J4 248 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 CTAG2O75638 210 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 CST2P09228 141 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 BTG1P62324 171 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 DCTN5Q9BTE1 182 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 RAB18Q9NP72 206 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 GZMKP49863 264 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 MRM2Q9UI43 246 aaKnown RBP17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 MPC1Q9Y5U8 109 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 CENPVL1A0A0U1RR11 272 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 RNASEK-C17orf49H0YIS7 233 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 POLR2GP62487 172 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 PAFAH1B2P68402 229 aa17.77■□□□□ 0.44
CDC42BPB-201ENST00000361246 SMPD2O60906 423 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 ATG4DQ86TL0 474 aaPredicted RBP17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR8D4Q8NGM9 314 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 LEAP2Q969E1 77 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 SOSTQ9BQB4 213 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 PIGMQ9H3S5 423 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 FRRS1LQ9P0K9 344 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 PPP1CCP36873 323 aaKnown RBP17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 DEFA6Q01524 100 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 UQCC2Q9BRT2 126 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 IL17BQ9UHF5 180 aa17.77■□□□□ 0.43
CDC42BPB-201ENST00000361246 PJVKQ0ZLH3 352 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 SMUG1Q53HV7 270 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 NEIL1Q96FI4 390 aaPredicted RBP17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 LNP1A1A4G5 178 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 TCL1AP56279 114 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 PDPNQ86YL7 162 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 RHBDL1O75783 438 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 LALBAP00709 142 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 NPY1RP25929 384 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 OVCH2Q7RTZ1 564 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR8I2Q8N0Y5 310 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 RPL7P18124 248 aaKnown RBP17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 ITLN1Q8WWA0 313 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 IGKV1D-16P01601 117 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 PF4P02776 101 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 GGNBP1Q5YKI7 109 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 CADM3Q8N126 398 aa17.76■□□□□ 0.43
CDC42BPB-201ENST00000361246 RAB5AP20339 215 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 LY6DQ14210 128 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 GAPTQ8N292 157 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 DYNC2LI1Q8TCX1 351 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 C1RLQ9NZP8 487 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 TRAPPC1Q9Y5R8 145 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 RGPD3A6NKT7 1758 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 CARFQ8N187 725 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 CCL28Q9NRJ3 127 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 RASL12Q9NYN1 266 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 BMPR1BO00238 502 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 GPR137Q96N19 417 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 COL4A5P29400 1685 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 A0A0J9YW62 118 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF737O75373 536 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 SLC35E4Q6ICL7 350 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 C5orf17Q8NAS9 161 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 FDCSPQ8NFU4 85 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 SP7Q8TDD2 431 aaPredicted RBP17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 TMEM140Q9NV12 185 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 TCRBV16S1A1N1A0A5B0 115 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 STARD6P59095 220 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 ASAH1Q13510 395 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR2W3Q7Z3T1 314 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 MSRB3Q8IXL7 192 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 SVILO95425 2214 aa17.75■□□□□ 0.43
CDC42BPB-201ENST00000361246 HTR1DP28221 377 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 RAB32Q13637 225 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 MOB1BQ7L9L4 216 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 NAA60Q9H7X0 242 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 ARFGEF1Q9Y6D6 1849 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 C9orf170A2RU37 121 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 UBE2L3P68036 154 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 INO80CQ6PI98 192 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 MRGPRGQ86SM5 289 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 COMMD1Q8N668 190 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 BTF3L4Q96K17 158 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 DIRC2Q96SL1 478 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 RPL13AP40429 203 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 MMP15P51511 669 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 ARF6P62330 175 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 RPL30P62888 115 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 SLC25A53Q5H9E4 307 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 MTCL1Q9Y4B5 1905 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 RRN3P1Q2M238 152 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms