RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 TMEM56Q96MV1 263 aa22.56■■□□□ 1.2
CUEDC1-201ENST00000360238 C12orf49Q9H741 205 aa22.56■■□□□ 1.2
CUEDC1-201ENST00000360238 PURGQ9UJV8 347 aaKnown RBP22.56■■□□□ 1.2
CUEDC1-201ENST00000360238 TMEM56-RWDD3S4R434 201 aa22.56■■□□□ 1.2
CUEDC1-201ENST00000360238 PRKACAP17612 351 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 GNG3P63215 75 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 HERPUD1Q15011 391 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 HIKESHIQ53FT3 197 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 MEX3BQ6ZN04 569 aaKnown RBP22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 NEK7Q8TDX7 302 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 NRIP2Q9BQI9 281 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 PLA2G2EQ9NZK7 142 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 SCTP09683 121 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 IL24Q13007 206 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 TBC1D26Q86UD7 250 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 PKIBQ9C010 78 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 ZDHHC8Q9ULC8 765 aa22.55■■□□□ 1.2
CUEDC1-201ENST00000360238 TRBV6-6A0A0A6YYG2 114 aa22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 MUC1P15941 1255 aaPredicted RBP22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 LYPD6BQ8NI32 183 aa22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 SECTM1Q8WVN6 248 aa22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 TLNRD1Q9H1K6 362 aa22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 TMEM231Q9H6L2 316 aa22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 TMEM9BQ9NQ34 198 aa22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 FAM212BQ9NTI7 297 aaPredicted RBP22.54■■□□□ 1.2
CUEDC1-201ENST00000360238 TRGV5A0A0B4J1U4 118 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SLC22A20A6NK97 555 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SEC11BP0C7V7 166 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 TSC22D1Q15714 1073 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SWI5Q1ZZU3 235 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 Q6ZRG5 221 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 DMBX1Q8NFW5 382 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SPIN2AQ99865 258 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SPIN2BQ9BPZ2 258 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 GINS3Q9BRX5 216 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 DEFB127Q9H1M4 99 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 RCL1Q9Y2P8 373 aaKnown RBP22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 UBE2J1Q9Y385 318 aaPredicted RBP22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 DUXBA0A1W2PPF3 345 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SNAPINO95295 136 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SUMF2Q8NBJ7 301 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 USB1Q9BQ65 265 aaKnown RBP22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 SPRR3Q9UBC9 169 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 LHX6Q9UPM6 363 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 ZNF175Q9Y473 711 aa22.53■■□□□ 1.2
CUEDC1-201ENST00000360238 J3QW42 95 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 IL32P24001 234 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 GNMTQ14749 295 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 ZNF766Q5HY98 468 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 SPIN3Q5JUX0 258 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 FAM122CQ6P4D5 195 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 ZNF818PQ6ZRF7 136 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 BSCL2Q96G97 398 aaPredicted RBP22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 HSPB6O14558 160 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 LILRA1O75019 489 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 ZNF806P0C7X5 589 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 TGIF1Q15583 401 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 MDP1Q86V88 176 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 TMEM178AQ8NBL3 297 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 MRPL30Q8TCC3 161 aaKnown RBP22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 ABHD14BQ96IU4 210 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 IFT22Q9H7X7 185 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 ZDHHC11Q9H8X9 412 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 FAM96BQ9Y3D0 163 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 R4GN57 208 aa22.52■■□□□ 1.2
CUEDC1-201ENST00000360238 CTRB1P17538 263 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 ARG2P78540 354 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 ESPL1Q14674 2120 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 CTRB2Q6GPI1 263 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 ZNF695Q8IW36 515 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 GAPTQ8N292 157 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 WFDC1Q9HC57 220 aa22.51■■□□□ 1.19
CUEDC1-201ENST00000360238 IGKV1-6A0A0C4DH72 117 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 NKX2-6A6NCS4 301 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 RNASEK-C17orf49H0YIS7 233 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 SLC34A2O95436 690 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 CD5P06127 495 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 FAM58AQ8N1B3 248 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 C11orf1Q9H5F2 150 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 DOCK7Q96N67 2140 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 IGKV1D-13A0A0B4J2D9 117 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 ARGFXA6NJG6 315 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 IGKV1-13P0DP09 117 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 SPP1P10451 314 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 NOVA1P51513 510 aaKnown RBP22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 RNFT1Q5M7Z0 435 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 ATP1A1-AS1Q5TC04 95 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 CLEC9AQ6UXN8 241 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 SELENOHQ8IZQ5 122 aaKnown RBP22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 OR51I2Q9H344 312 aa22.5■■□□□ 1.19
CUEDC1-201ENST00000360238 UCP1P25874 307 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 SOX8P57073 446 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 ZNF880Q6PDB4 577 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 BOD1Q96IK1 185 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 J3QT63 122 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 H2AFB1P0C5Y9 115 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 DANCRP0C864 163 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 TBC1D28Q2M2D7 210 aa22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 DHRS7BQ6IAN0 325 aaPredicted RBP22.49■■□□□ 1.19
CUEDC1-201ENST00000360238 C5orf24Q7Z6I8 188 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms