RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 FOXRED2Q8IWF2 684 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 ZNF283Q8N7M2 679 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 SNIP1Q8TAD8 396 aaKnown RBP16.06■□□□□ 0.16
SNX11-201ENST00000359238 CALHM2Q9HA72 323 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 BTBD17A6NE02 478 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 PAX1P15863 534 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 RPS2P15880 293 aaKnown RBP16.06■□□□□ 0.16
SNX11-201ENST00000359238 CAMLGP49069 296 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H3AP68431 136 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 HIST2H3PS2Q5TEC6 136 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 ZNF529Q6P280 563 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 OR52N4Q8NGI2 321 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 LURAP1Q96LR2 239 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 C19orf12Q9NSK7 152 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 TMEM38BQ9NVV0 291 aa16.06■□□□□ 0.16
SNX11-201ENST00000359238 DEDDO75618 318 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
SNX11-201ENST00000359238 SURF2Q15527 256 aaPredicted RBP16.05■□□□□ 0.16
SNX11-201ENST00000359238 ZNF774Q6NX45 483 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 LHFPL1Q86WI0 220 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 SLC22A24Q8N4F4 322 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 RBM14Q96PK6 669 aaKnown RBP16.05■□□□□ 0.16
SNX11-201ENST00000359238 SMDT1Q9H4I9 107 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 ZDHHC11Q9H8X9 412 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 SLC7A10Q9NS82 523 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 PLEK2Q9NYT0 353 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 WASF3Q9UPY6 502 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 STRAPQ9Y3F4 350 aaKnown RBP16.05■□□□□ 0.16
SNX11-201ENST00000359238 ZZEF1O43149 2961 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 TRGV5A0A0B4J1U4 118 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 CHRM2P08172 466 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 GSTP1P09211 210 aaKnown RBP16.05■□□□□ 0.16
SNX11-201ENST00000359238 SNAI3Q3KNW1 292 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 FAM27BQ5VT28 67 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 SPNS3Q6ZMD2 512 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 RTN4RL2Q86UN3 420 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 COMMD2Q86X83 199 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 HIST3H2BBQ8N257 126 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 OR13C9Q8NGT0 318 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 SMIM3Q9BZL3 60 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 GPR35Q9HC97 309 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 ZDHHC8Q9ULC8 765 aa16.05■□□□□ 0.16
SNX11-201ENST00000359238 TRAV17A0A0B4J275 112 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 ZNF587BE7ETH6 402 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 PPP1R2P9O14990 202 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 OR13C7P0DN81 318 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 GNALP38405 381 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 ZNF84P51523 738 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 ZNF674Q2M3X9 581 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 GJC3Q8NFK1 279 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 NEU1Q99519 415 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 PLEKHA2Q9HB19 425 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 FBXO7Q9Y3I1 522 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 MMP24Q9Y5R2 645 aa16.04■□□□□ 0.16
SNX11-201ENST00000359238 ZNF503-AS2A6NEH8 195 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 TMEM14DPA8MWL7 114 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BKO60814 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BJP06899 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 ZNF32P17041 273 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BOP23527 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BBP33778 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BDP58876 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BCP62807 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST2H2BEQ16778 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 IAH1Q2TAA2 248 aaPredicted RBP16.03■□□□□ 0.16
SNX11-201ENST00000359238 SOHLH1Q5JUK2 328 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.03■□□□□ 0.16
SNX11-201ENST00000359238 UNQ6494/PRO21346Q6UXR6 183 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 GPR137CQ8N3F9 429 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 CCDC54Q8NEL0 328 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 LFNGQ8NES3 379 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 OR5H2Q8NGV7 314 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BHQ93079 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 FOXB1Q99853 325 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BNQ99877 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 HIST1H2BMQ99879 126 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 GINS3Q9BRX5 216 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 OSGIN2Q9Y236 505 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 PUS1Q9Y606 427 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNX11-201ENST00000359238 PIEZO2Q9H5I5 2752 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 GUCA1AP43080 201 aaPredicted RBP16.03■□□□□ 0.16
SNX11-201ENST00000359238 KHDC3LQ587J8 217 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 NUFIP2Q7Z417 695 aaKnown RBP16.03■□□□□ 0.16
SNX11-201ENST00000359238 OR13G1Q8NGZ3 307 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 TMEM68Q96MH6 324 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 PRRG4Q9BZD6 226 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 TUBD1Q9UJT1 453 aa16.03■□□□□ 0.16
SNX11-201ENST00000359238 A0A087WWC5 75 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 BORCS7-ASMTA0A0B4J1R7 106 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 A0A1B0GWJ7 208 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 ZNF724A8MTY0 619 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 SYNGR4O95473 234 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 NR2C1P13056 603 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 AADACL3Q5VUY0 350 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 CLEC9AQ6UXN8 241 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 SUMF2Q8NBJ7 301 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 C1orf123Q9NWV4 160 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 MCTS1Q9ULC4 181 aaKnown RBP16.02■□□□□ 0.16
SNX11-201ENST00000359238 TP53TG5Q9Y2B4 290 aa16.02■□□□□ 0.16
SNX11-201ENST00000359238 IGKV3D-15A0A087WSY6 115 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms