RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PIGYQ3MUY2 71 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 NRN1LQ496H8 165 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 NKAPLQ5M9Q1 402 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 ATPAF1Q5TC12 328 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 RTL6Q6ICC9 239 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 STEAP1BQ6NZ63 245 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 IGFL3Q6UXB1 125 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 GLDNQ6ZMI3 551 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 SLC30A7Q8NEW0 376 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 HDHD3Q9BSH5 251 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 CHST6Q9GZX3 395 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 UQCC1Q9NVA1 299 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 CREBL2O60519 120 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 SFTPBP07988 381 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 PAX1P15863 534 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 AP3S2P59780 193 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 GMFBP60983 142 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 OR8B8Q15620 311 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 TAF9Q16594 264 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 SCGB2B2Q4G0G5 96 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 C6orf201Q7Z4U5 140 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 ZNF610Q8N9Z0 462 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 KCNG3Q8TAE7 436 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 BORCS8Q96FH0 119 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 TNFSF13O75888 250 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 CYB5AP00167 134 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 RLN1P04808 185 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 RPA2P15927 270 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 SELEP16581 610 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 RAB5AP20339 215 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 CD200P41217 278 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 GPM6AP51674 278 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 CXADRP78310 365 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 PLP2Q04941 152 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 C2orf68Q2NKX9 166 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 Q6ZSR3 168 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 MRPL21Q7Z2W9 205 aaKnown RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 CISD2Q8N5K1 135 aaKnown RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 S100A13Q99584 98 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 PARD6GQ9BYG4 376 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-202ENST00000358966 FAM215AQ9Y5M1 114 aa10.86□□□□□ -0.67
GGPS1-202ENST00000358966 OR14I1A6ND48 311 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 F8VVB4 439 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 F8VWA3 439 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 AMY2AP04746 511 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 BLVRBP30043 206 aaPredicted RBP10.85□□□□□ -0.67
GGPS1-202ENST00000358966 APLNRP35414 380 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 NPBWR2P48146 333 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 HOXA4Q00056 320 aaPredicted RBP10.85□□□□□ -0.67
GGPS1-202ENST00000358966 SORDQ00796 357 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 ALKBH6Q3KRA9 238 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 OR2T2Q6IF00 324 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 Q8NFD4 153 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 HPSE2Q8WWQ2 592 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 MICU1Q9BPX6 476 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 IL36RNQ9UBH0 155 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 PKDREJQ9NTG1 2253 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 MKRN2OSH3BPM6 223 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 ZNF205O95201 554 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 OR4E1P0C645 316 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 HRH1P35367 487 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 RNASE10Q5GAN6 216 aaKnown RBP10.85□□□□□ -0.67
GGPS1-202ENST00000358966 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 FOXRED2Q8IWF2 684 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 PTX4Q96A99 478 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 SLC6A7Q99884 636 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 REPIN1Q9BWE0 567 aaKnown RBP10.85□□□□□ -0.67
GGPS1-202ENST00000358966 FZR1Q9UM11 496 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 FAM96BQ9Y3D0 163 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 SHANK1Q9Y566 2161 aa10.85□□□□□ -0.67
GGPS1-202ENST00000358966 POLEQ07864 2286 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 A0A1W2PPH5 198 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 FAM221AA4D161 298 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 A8MWP6 167 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 ZNF736B4DX44 427 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-202ENST00000358966 XRCC2O43543 280 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 CRYABP02511 175 aaKnown RBP10.84□□□□□ -0.67
GGPS1-202ENST00000358966 CSF1P09603 554 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 AKAIN1P0CW23 69 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 VSIG10L2P0DP72 767 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 HIST1H1DP16402 221 aaKnown RBP10.84□□□□□ -0.67
GGPS1-202ENST00000358966 ARR3P36575 388 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 TMEM42Q69YG0 159 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 LPCAT3Q6P1A2 487 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 Q6ZT83 130 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 CXorf67Q86X51 503 aaPredicted RBP10.84□□□□□ -0.67
GGPS1-202ENST00000358966 OR4A4PQ8NGN8 299 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 ZNF816-ZNF321PA0A0X1KG74 233 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 GEMIN2O14893 280 aaKnown RBP10.84□□□□□ -0.67
GGPS1-202ENST00000358966 DIRAS3O95661 229 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 LINC00614P0C842 121 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 PMELP40967 661 aa10.84□□□□□ -0.67
GGPS1-202ENST00000358966 UBE2NP61088 152 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms