RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RNF150Q9ULK6 438 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 PI4KAP42356 2102 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ARHGAP21Q5T5U3 1957 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 A0A0J9YW62 118 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 UBE2CO00762 179 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 IFNA1P01562 189 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ERVS71-1P61550 626 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 LSM6P62312 80 aaKnown RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 BATFQ16520 125 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 WDR25Q64LD2 544 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 LHX4Q969G2 390 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 FOXB1Q99853 325 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SMIM7Q9BQ49 75 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 LIME1Q9H400 295 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 AURKAIP1Q9NWT8 199 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 OCIAD1Q9NX40 245 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 STARD10Q9Y365 291 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 GVINP1Q7Z2Y8 2422 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SHISA7A6NL88 538 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF705FA8MVS1 300 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF732B4DXR9 585 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF705DP0CH99 300 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF705BP0CI00 300 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 RNF224P0DH78 156 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 FOSL2P15408 326 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 HNF1AP20823 631 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 CFPP27918 469 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 CTAG1AP78358 180 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SRPXP78539 464 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 PLP2Q04941 152 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ENDOGQ14249 297 aaKnown RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SSX2Q16385 188 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SPNS3Q6ZMD2 512 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF808Q8N4W9 903 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF709Q8N972 641 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 FAM131CQ96AQ9 280 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 TRAPPC2LQ9UL33 140 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 UBE2L5PA0A1B0GUS4 154 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 A0A1B0GV90 55 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 A0A1W2PNV4 684 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 VAMP5O95183 116 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 PGA5P0DJD9 388 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 RPS2P15880 293 aaKnown RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 BCL3P20749 454 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 FUT6P51993 359 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 HLA-DRB3P79483 266 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 SPINK9Q5DT21 86 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CST9LP1Q5W188 147 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 OR10J5Q8NHC4 309 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 Q8WTZ3 238 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 PLPPR2Q96GM1 343 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 NOSIPQ9Y314 301 aaKnown RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 KLF2Q9Y5W3 355 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 A0A087X0M5 115 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 A0A1B0GX30 115 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 GJE1A6NN92 205 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 SIRPB1O00241 398 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CD63P08962 238 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 LAMA1P25391 3075 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 PLGLB1Q02325 96 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 GAMTQ14353 236 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 RAB35Q15286 201 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 WFIKKN1Q96NZ8 548 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 PSENENQ9NZ42 101 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 IL36RNQ9UBH0 155 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CACNG5Q9UF02 275 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 TRDCB7Z8K6 153 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CXCL1P09341 107 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 AGAP20933 346 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 C10orf91Q5T1B1 145 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CALHM1Q8IU99 346 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF100Q8IYN0 542 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 FAM89BQ8N5H3 189 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF441Q8N8Z8 693 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CA5BP1Q8WTZ4 195 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 ABHD3Q8WU67 409 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 NTNG2Q96CW9 530 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 BOD1Q96IK1 185 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 GINS3Q9BRX5 216 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 FAM234AQ9H0X4 552 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 C12orf49Q9H741 205 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 SLC25A22Q9H936 323 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 TUBD1Q9UJT1 453 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 A0A0U1RQV5 110 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 H7BYZ3 331 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CLDN34H7C241 214 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 DFFBO76075 338 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 MMP7P09237 267 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 PCBD1P61457 104 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 BAXQ07812 192 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CDPF1Q6NVV7 123 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF66Q6ZN08 573 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 OR4F5Q8NH21 305 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 CPT1CQ8TCG5 803 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 HLA-CQ95604 372 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 THOC3Q96J01 351 aaKnown RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 LURAP1Q96LR2 239 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms