RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PHF1O43189 567 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 DANCRP0C864 163 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 CD38P28907 300 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SLC35A1P78382 337 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SLC25A24Q6NUK1 477 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 VHLLQ6RSH7 139 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 TMEM156Q8N614 296 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 TMEM217Q8N7C4 229 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZFP62Q8NB50 900 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 LFNGQ8NES3 379 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR11L1Q8NGX0 322 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 GPHA2Q96T91 129 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 A0A1W2PN81 502 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR2J2O76002 312 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF728P0DKX0 622 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 FGF5P12034 268 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 CHRNA7P36544 502 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SUCLG1P53597 346 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZP4Q12836 540 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 HIKESHIQ53FT3 197 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 MRPL13Q9BYD1 178 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 MAGT1Q9H0U3 335 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SMDT1Q9H4I9 107 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 MOB1AQ9H8S9 216 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 WFDC1Q9HC57 220 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 VAX2Q9UIW0 290 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 RPH3ALQ9UNE2 315 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 LILRA5A6NI73 299 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SERPINE3A8MV23 424 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 H0YL77 283 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 TNFSF10P50591 281 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 IL15RAQ13261 267 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SPIN3Q5JUX0 258 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF429Q86V71 674 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 DTX1Q86Y01 620 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 SLC38A9Q8NBW4 561 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 NUDT10Q8NFP7 164 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 TSTD1Q8NFU3 115 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 TMEM18Q96B42 140 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 TVP23CQ96ET8 276 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 LYZL4Q96KX0 146 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 ALKBH3Q96Q83 286 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 NIPSNAP3BQ9BS92 247 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 PCED1AQ9H1Q7 454 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 LIME1Q9H400 295 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
CDC42SE1-201ENST00000357235 FRYLO94915 3013 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 YLPM1P49750 1951 aaKnown RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 NCOA6Q14686 2063 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 FAM186AA6NE01 2351 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 KIR2DL5BA0A0G2JN68 375 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 KIR2DL5BA0A0G2JPC4 375 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 XKRY2A2RUG3 117 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 E5RGE8 158 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 ONECUT2O95948 504 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF100Q8IYN0 542 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 KIR2DL5AQ8N109 375 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 Q8NFD4 153 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 MRGPRDQ8TDS7 321 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 ABHD14AQ9BUJ0 271 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR2J1Q9GZK6 312 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 CLEC1BQ9P126 229 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 LRFN1Q9P244 771 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 FBLN5Q9UBX5 448 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 FOXD3Q9UJU5 478 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 NSG2Q9Y328 171 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 NKX6-3A6NJ46 265 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 CEACAM18A8MTB9 384 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 TLX3O43711 291 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 TRAF3IP2O43734 574 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 HPRT1P00492 218 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 TFPI2P48307 235 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 RAB7AP51149 207 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 CCR5P51681 352 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 KLF3P57682 345 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 PMS2P11Q13670 270 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 GNMTQ14749 295 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 PLXDC1Q8IUK5 500 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 TP53RKQ96S44 253 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 NUDT16L1Q9BRJ7 211 aaKnown RBP7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 AK3Q9UIJ7 227 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 TCFL5Q9UL49 500 aa7.16□□□□□ -1.26
CDC42SE1-201ENST00000357235 NSG1A0A0A6YYJ2 146 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 FAM24AA6NFZ4 105 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 CRYM-AS1A6NIL9 109 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 CST7O76096 145 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 SEC11BP0C7V7 166 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 PATE4P0C8F1 98 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 MDKP21741 143 aaPredicted RBP7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 S100A7P31151 101 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 SELENOTP62341 195 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 VAMP2P63027 116 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 CFHR1Q03591 330 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 ATP6V1FQ16864 119 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 PIGYQ3MUY2 71 aa7.15□□□□□ -1.26
CDC42SE1-201ENST00000357235 NUFIP2Q7Z417 695 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms