RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 KPTNQ9Y664 436 aa13.16□□□□□ -0.3
PTBP1-203ENST00000356948 MGAQ8IWI9 3026 aa13.16□□□□□ -0.3
PTBP1-203ENST00000356948 CYB5BO43169 146 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 TAGLN2P37802 199 aaKnown RBP13.15□□□□□ -0.3
PTBP1-203ENST00000356948 RBP2P50120 134 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 IZUMO4Q1ZYL8 232 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 PLCXD3Q63HM9 321 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
PTBP1-203ENST00000356948 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 MLF1P58340 268 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
PTBP1-203ENST00000356948 SUMF2Q8NBJ7 301 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 NAT6Q93015 286 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
PTBP1-203ENST00000356948 LILRA1O75019 489 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 HAGHQ16775 308 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 ABCA11PQ4W5N1 156 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 OR2T2Q6IF00 324 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 FOXL2NBQ6ZUU3 175 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 TIPARPQ7Z3E1 657 aaKnown RBP13.15□□□□□ -0.3
PTBP1-203ENST00000356948 FOXB1Q99853 325 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 PRRG4Q9BZD6 226 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 DOK5Q9P104 306 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 DMRT1Q9Y5R6 373 aa13.15□□□□□ -0.3
PTBP1-203ENST00000356948 ATMQ13315 3056 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 UBE2CO00762 179 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 HLA-HP01893 362 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 CTSDP07339 412 aaPredicted RBP13.14□□□□□ -0.31
PTBP1-203ENST00000356948 UBE2KP61086 200 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 GUK1Q16774 197 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 PMS2CLQ68D20 193 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 DNAJB11Q9UBS4 358 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 CBR3O75828 277 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 OR2Y1Q8NGV0 311 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 ZNF442Q9H7R0 627 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 METTL1Q9UBP6 276 aaKnown RBP13.14□□□□□ -0.31
PTBP1-203ENST00000356948 SMCO3A2RU48 225 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 MBP02144 154 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 MMP7P09237 267 aaPredicted RBP13.14□□□□□ -0.31
PTBP1-203ENST00000356948 SCTP09683 121 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 PCP4P48539 62 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 SULT1A2P50226 295 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 CCL20P78556 96 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 HNF4GQ14541 408 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 SLC25A24Q6NUK1 477 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 OSR2Q8N2R0 312 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 SCGB3A2Q96PL1 93 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 RARRES2Q99969 163 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 OR2H1Q9GZK4 316 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 NAA60Q9H7X0 242 aa13.14□□□□□ -0.31
PTBP1-203ENST00000356948 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 NGFP01138 241 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 IFNA10P01566 189 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 H2AFB1P0C5Y9 115 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 PPP1CCP36873 323 aaKnown RBP13.13□□□□□ -0.31
PTBP1-203ENST00000356948 UNQ6494/PRO21346Q6UXR6 183 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 IL34Q6ZMJ4 242 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 ZNF611Q8N823 705 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 MSI2Q96DH6 328 aaKnown RBP13.13□□□□□ -0.31
PTBP1-203ENST00000356948 NKX2-6A6NCS4 301 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 CST4P01036 141 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 CD5P06127 495 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 GPR137CQ8N3F9 429 aa13.13□□□□□ -0.31
PTBP1-203ENST00000356948 CDRT15L2A8MXV6 281 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 TCN2P20062 427 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 BCL3P20749 454 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 DDTP30046 118 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 RAC3P60763 192 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 ZXDAP98168 799 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 RAB35Q15286 201 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 PPP1R32Q7Z5V6 425 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 C14orf144Q96I85 54 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 NECAP2Q9NVZ3 263 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 TUBD1Q9UJT1 453 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 IGKV1D-13A0A0B4J2D9 117 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 hCG_38984A0A1B0GV85 526 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 OR6C6A6NF89 314 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 SLC34A2O95436 690 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
PTBP1-203ENST00000356948 IGKV1-13P0DP09 117 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 GPM6AP51674 278 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 DVL1P1P54792 670 aaPredicted RBP13.12□□□□□ -0.31
PTBP1-203ENST00000356948 CXorf66Q5JRM2 361 aaPredicted RBP13.12□□□□□ -0.31
PTBP1-203ENST00000356948 DMBX1Q8NFW5 382 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 WDR54Q9H977 334 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 GDF1P27539 372 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 ZNF133P52736 654 aaPredicted RBP13.12□□□□□ -0.31
PTBP1-203ENST00000356948 OR1J1Q8NGS3 322 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 SCRT1Q9BWW7 348 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 SLC7A10Q9NS82 523 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 CACFD1Q9UGQ2 172 aa13.12□□□□□ -0.31
PTBP1-203ENST00000356948 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
PTBP1-203ENST00000356948 IFNA21P01568 189 aa13.11□□□□□ -0.31
PTBP1-203ENST00000356948 OR8G1Q15617 311 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms