RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 VENTXO95231 258 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 CYB5AP00167 134 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 CD74P04233 296 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 GLAP06280 429 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 HIST1H1DP16402 221 aaKnown RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 MGMTP16455 207 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 ANOS1P23352 680 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 OR3A4PP47883 348 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 IDH3GP51553 393 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 BCAP31P51572 246 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 UCP2P55851 309 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 TAS2R19P59542 299 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 PPP1CBP62140 327 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 GNG3P63215 75 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 IL24Q13007 206 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 PDZK1IP1Q13113 114 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 SNTB2Q13425 540 aaKnown RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 MEF2DQ14814 521 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 PLA1AQ53H76 456 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 FAM76BQ5HYJ3 339 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 PLCXD3Q63HM9 321 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF57Q68EA5 555 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 MKXQ8IYA7 352 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF101Q8IZC7 436 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 PAQR4Q8N4S7 273 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 OR52I2Q8NH67 350 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 OR56B4Q8NH76 319 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 OR5P3Q8WZ94 311 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 GTF3AQ92664 365 aaKnown RBP5.85□□□□□ -1.47
VPS13A-201ENST00000355766 RTL8AQ9BWD3 113 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 CHST6Q9GZX3 395 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 LPAR5Q9H1C0 372 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 ATG5Q9H1Y0 275 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 DPAGT1Q9H3H5 408 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 IFT22Q9H7X7 185 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 SPACA1Q9HBV2 294 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 CBLN4Q9NTU7 201 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 SLC2A8Q9NY64 477 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 POLDIP2Q9Y2S7 368 aa5.85□□□□□ -1.47
VPS13A-201ENST00000355766 TRAV18A0A075B6X5 111 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 IGHV2OR16-5A0A0B4J2B6 119 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 FAM240BA0A1B0GVZ2 78 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 TMEM89A2RUT3 159 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 FUOMA2VDF0 154 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 LRP5LA4QPB2 252 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 C5orf63A6NC05 138 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 DPRXA6NFQ7 191 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 FAM157AC9JC47 383 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 MFNGO00587 321 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 PFDN1O60925 122 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 PTBP3O95758 552 aaKnown RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 TGFAP01135 160 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 CRYAAP02489 173 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 CSTBP04080 98 aaKnown RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 CECR9P0C854 216 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 AKAIN1P0CW23 69 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 DTYMKP23919 212 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 SRP14P37108 136 aaKnown RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 EFNB2P52799 333 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 PRDX4Q13162 271 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 IL13RA2Q14627 380 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 RSU1Q15404 277 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 TSC22D1Q15714 1073 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 SRSF7Q16629 238 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 MPV17LQ2QL34 196 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF260Q3ZCT1 412 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 HIST2H2BDQ6DRA6 164 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 Q6ZTK2 550 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 SNX29P2Q8IUI4 249 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 TMEM229BQ8NBD8 167 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 NUP37Q8NFH4 326 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 OR51T1Q8NGJ9 327 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 HPSE2Q8WWQ2 592 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 ST8SIA4Q92187 359 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 RAB3CQ96E17 227 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 SEH1LQ96EE3 360 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 MARS2Q96GW9 593 aaKnown RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 MED30Q96HR3 178 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 MICU1Q9BPX6 476 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 SLC25A21Q9BQT8 299 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 TLNRD1Q9H1K6 362 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 POFUT1Q9H488 388 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 SEBOXQ9HB31 216 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 GPR173Q9NS66 373 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 ING3Q9NXR8 418 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 NKIRAS2Q9NYR9 191 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 MRPS7Q9Y2R9 242 aaKnown RBP5.84□□□□□ -1.47
VPS13A-201ENST00000355766 STARD10Q9Y365 291 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 N6AMT1Q9Y5N5 214 aa5.84□□□□□ -1.47
VPS13A-201ENST00000355766 IGLV3-9A0A075B6K5 115 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 IGHV1-18A0A0C4DH31 117 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 IGHV4-61A0A0C4DH41 118 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 C7orf66A4D0T2 115 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ZNF736B4DX44 427 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-201ENST00000355766 H3BSH0 61 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 J3QT63 122 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 NDUFS8O00217 210 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 ABCD4O14678 606 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 LANCL1O43813 399 aa5.83□□□□□ -1.48
VPS13A-201ENST00000355766 NOS1APO75052 506 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms