RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 VKORC1Q9BQB6 163 aa21.73■■□□□ 1.07
CLK2-201ENST00000355560 CHD8Q9HCK8 2581 aa21.72■■□□□ 1.07
CLK2-201ENST00000355560 TRGV8A0A0C4DH27 118 aa21.72■■□□□ 1.07
CLK2-201ENST00000355560 COQ8AQ8NI60 647 aa21.72■■□□□ 1.07
CLK2-201ENST00000355560 MOB3AQ96BX8 217 aa21.72■■□□□ 1.07
CLK2-201ENST00000355560 SEC22AQ96IW7 307 aa21.72■■□□□ 1.07
CLK2-201ENST00000355560 hCG_1807616A0A1W2PRN6 198 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 TRDCB7Z8K6 153 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 SH2D1BO14796 132 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 WNT9BO14905 357 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 ID4P47928 161 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 RPS23P62266 143 aaKnown RBP21.71■■□□□ 1.07
CLK2-201ENST00000355560 HOXA4Q00056 320 aaPredicted RBP21.71■■□□□ 1.07
CLK2-201ENST00000355560 SRSF4Q08170 494 aaKnown RBP21.71■■□□□ 1.07
CLK2-201ENST00000355560 MZT1Q08AG7 82 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 ANKRD55Q3KP44 614 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 ELMOD3Q96FG2 381 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 DMRTA2Q96SC8 542 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 TMEM165Q9HC07 324 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 OR14J1Q9UGF5 321 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 FXYD6-FXYD2A0A087WZ82 144 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 TRBV6-6A0A0A6YYG2 114 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 ZSCAN5BA6NJL1 495 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 BET1O15155 118 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 CD8AP01732 235 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 AADACP22760 399 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 HERV-K104P61576 105 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 HERPUD1Q15011 391 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 WFDC8Q8IUA0 241 aa21.71■■□□□ 1.07
CLK2-201ENST00000355560 HAND1O96004 215 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 PPYP01298 95 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 MDH2P40926 338 aaKnown RBP21.7■■□□□ 1.06
CLK2-201ENST00000355560 PIGPP57054 158 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 TMEM108Q6UXF1 575 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 IGLV3-9A0A075B6K5 115 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 A0A0B4J2A0 478 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 ARPC5O15511 151 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 TK1P04183 234 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 CEBPDP49716 269 aaPredicted RBP21.7■■□□□ 1.06
CLK2-201ENST00000355560 ABCA11PQ4W5N1 156 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 SGPP2Q8IWX5 399 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 SHPKQ9UHJ6 478 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 MEMO1Q9Y316 297 aa21.7■■□□□ 1.06
CLK2-201ENST00000355560 CHD3Q12873 2000 aaKnown RBP21.7■■□□□ 1.06
CLK2-201ENST00000355560 TEX13DA0A0J9YY54 714 aaPredicted RBP21.69■■□□□ 1.06
CLK2-201ENST00000355560 CRYM-AS1A6NIL9 109 aa21.69■■□□□ 1.06
CLK2-201ENST00000355560 IFNA2P01563 188 aa21.69■■□□□ 1.06
CLK2-201ENST00000355560 RCC1P18754 421 aaPredicted RBP21.69■■□□□ 1.06
CLK2-201ENST00000355560 SEC61A1P61619 476 aaKnown RBP21.69■■□□□ 1.06
CLK2-201ENST00000355560 PLPPR1Q8TBJ4 325 aa21.69■■□□□ 1.06
CLK2-201ENST00000355560 C1orf123Q9NWV4 160 aa21.69■■□□□ 1.06
CLK2-201ENST00000355560 TREM2Q9NZC2 230 aa21.69■■□□□ 1.06
CLK2-201ENST00000355560 TRAV14DV4A0A0A6YYC5 116 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 C5orf51A6NDU8 294 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 CXCL2P19875 107 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 SERPINF1P36955 418 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 CD200P41217 278 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 CASP6P55212 293 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 ATXN7L3Q14CW9 347 aaPredicted RBP21.68■■□□□ 1.06
CLK2-201ENST00000355560 ZNF880Q6PDB4 577 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 ACP7Q6ZNF0 438 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 ZCCHC14Q8WYQ9 949 aaKnown RBP21.68■■□□□ 1.06
CLK2-201ENST00000355560 PLCE1Q9P212 2302 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 RFPL4AA6NLU0 287 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 HMSDA8MTL9 139 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 RFPL4AL1F8VTS6 287 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 LRRC37A5PQ49AS3 106 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 SHEQ5VZ18 495 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 UNQ6494/PRO21346Q6UXR6 183 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 SLC38A6Q8IZM9 456 aa21.68■■□□□ 1.06
CLK2-201ENST00000355560 MRPL37Q9BZE1 423 aaKnown RBP21.68■■□□□ 1.06
CLK2-201ENST00000355560 IGKV1-6A0A0C4DH72 117 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 C13orf42A0A1B0GVH6 325 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 ADAP1O75689 374 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 PTAFRP25105 342 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 UCP3P55916 312 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 FGL1Q08830 312 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 GSG1LQ6UXU4 331 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 PPP1R1CQ8WVI7 109 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 RAB18Q9NP72 206 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 SLC2A9Q9NRM0 540 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 COMMD9Q9P000 198 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 GLS2Q9UI32 602 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 L7N2F9 121 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 THBDP07204 575 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 CTXN2P0C2S0 81 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 RBMXP38159 391 aaKnown RBP21.67■■□□□ 1.06
CLK2-201ENST00000355560 HLA-DRB3P79483 266 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 PHLDA2Q53GA4 152 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 ZNF497Q6ZNH5 498 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 LRRC29Q8WV35 223 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 RTN4IP1Q8WWV3 396 aaPredicted RBP21.67■■□□□ 1.06
CLK2-201ENST00000355560 PIK3IP1Q96FE7 263 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 RASL12Q9NYN1 266 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 POLEQ07864 2286 aa21.67■■□□□ 1.06
CLK2-201ENST00000355560 H7C1Q1 480 aa21.66■■□□□ 1.06
CLK2-201ENST00000355560 DIRAS3O95661 229 aa21.66■■□□□ 1.06
CLK2-201ENST00000355560 SMIM21Q3B7S5 101 aa21.66■■□□□ 1.06
CLK2-201ENST00000355560 NUP37Q8NFH4 326 aa21.66■■□□□ 1.06
CLK2-201ENST00000355560 OR2V2Q96R30 315 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms