RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 TMED7-TICAM2A0A0A6YYA0 188 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 TNFSF12O43508 249 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 ZNF121P58317 390 aaPredicted RBP6.81□□□□□ -1.32
CD46-203ENST00000354848 GRINAQ7Z429 371 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 DEFB128Q7Z7B8 93 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 MRGPRGQ86SM5 289 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 CALHM1Q8IU99 346 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 PRR22Q8IZ63 422 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 ADPRHL1Q8NDY3 354 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 CCL4L1Q8NHW4 92 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 MBD3L1Q8WWY6 194 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 NXF5Q9H1B4 397 aaKnown RBP6.81□□□□□ -1.32
CD46-203ENST00000354848 MED29Q9NX70 200 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 RNF115Q9Y4L5 304 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 SZT2Q5T011 3432 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 DOCK11Q5JSL3 2073 aa6.81□□□□□ -1.32
CD46-203ENST00000354848 NPIPA5E9PKD4 350 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 MS4A18H0YCH9 400 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 K7EP13 123 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 KBTBD11O94819 623 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 NXPH2O95156 264 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 GP1BBP13224 206 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 GCH1P30793 250 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 KLF3P57682 345 aaPredicted RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 IGLV3-21P80748 117 aaPredicted RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 MMDQ15546 238 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 MS4A18Q3C1V0 323 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 Q6ZWC4 215 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 CCDC3Q9BQI4 270 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 RSG1Q9BU20 258 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 VAMP8Q9BV40 100 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 MOB1AQ9H8S9 216 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 FAM60AQ9NP50 221 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 PRTFDC1Q9NRG1 225 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 RNF150Q9ULK6 438 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 NPIPA1Q9UND3 350 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 OTOL1A6NHN0 477 aaPredicted RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 A8MXE2 369 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 NXPH3O95157 252 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 UBE2NP61088 152 aaKnown RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 RPL15P61313 204 aaKnown RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 GPM6BQ13491 265 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 DEFB110Q30KQ9 67 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 SLC25A24Q6NUK1 477 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 STPG4Q8N801 248 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 ZNF321PQ8N8H1 164 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 OR1L6Q8NGR2 347 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 RPUSD4Q96CM3 377 aaKnown RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 GABRG3Q99928 467 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 APOOQ9BUR5 198 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 TBX21Q9UL17 535 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 C3orf85A0A1B0GTC6 90 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 PRSS38A1L453 326 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 H0YIG0 161 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 TCN2P20062 427 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 PLPPR1Q8TBJ4 325 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 OIT3Q8WWZ8 545 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 ANAPC16Q96DE5 110 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 LIN37Q96GY3 246 aaPredicted RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 CIB3Q96Q77 187 aaPredicted RBP6.8□□□□□ -1.32
CD46-203ENST00000354848 SGIP1Q9BQI5 828 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 MANBALQ9NQG1 85 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 DEC1Q9P2X7 70 aa6.8□□□□□ -1.32
CD46-203ENST00000354848 A0A1W2PP55 124 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 ADAM20O43506 726 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 GALR2O43603 387 aaPredicted RBP6.79□□□□□ -1.32
CD46-203ENST00000354848 CHST1O43916 411 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 ZNF737O75373 536 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 TRAPPC6AO75865 159 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 FCGR2AP12318 317 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 PGCP20142 388 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 CCL1P22362 96 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 SRP14P37108 136 aaKnown RBP6.79□□□□□ -1.32
CD46-203ENST00000354848 CDKN1AP38936 164 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 ZNF133P52736 654 aaPredicted RBP6.79□□□□□ -1.32
CD46-203ENST00000354848 ID3Q02535 119 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 POU3F1Q03052 451 aaPredicted RBP6.79□□□□□ -1.32
CD46-203ENST00000354848 RIPPLY2Q5TAB7 128 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 DOK3Q7L591 496 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 RD3Q7Z3Z2 195 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 LYG1Q8N1E2 194 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 CCDC71LQ8N9Z2 235 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 VN1R17PQ8TDU5 208 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 MOB3AQ96BX8 217 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 SLC46A1Q96NT5 459 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 TECTBQ96PL2 329 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 SIGLEC12Q96PQ1 595 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 SPIN2AQ99865 258 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 SPIN2BQ9BPZ2 258 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 REPIN1Q9BWE0 567 aaKnown RBP6.79□□□□□ -1.32
CD46-203ENST00000354848 TMEM222Q9H0R3 208 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 GSX1Q9H4S2 264 aaPredicted RBP6.79□□□□□ -1.32
CD46-203ENST00000354848 PLA2G3Q9NZ20 509 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 TRAPPC1Q9Y5R8 145 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 LHFPL6Q9Y693 200 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 E9PLN8 166 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 AQP7O14520 342 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 MPPED1O15442 326 aa6.79□□□□□ -1.32
CD46-203ENST00000354848 SEMA4FO95754 770 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms