RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ACOT11Q8WXI4 607 aaPredicted RBP9.21□□□□□ -0.94
RTN3-204ENST00000354497 RAB3CQ96E17 227 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 MEPEQ9NQ76 525 aaPredicted RBP9.21□□□□□ -0.94
RTN3-204ENST00000354497 SLC25A37Q9NYZ2 338 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 ZNRD1Q9P1U0 126 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 ONECUT1Q9UBC0 465 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 SAMD4AQ9UPU9 718 aaKnown RBP9.21□□□□□ -0.94
RTN3-204ENST00000354497 BIRC6Q9NR09 4857 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 E9PI62 339 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 METTL15P1P0C7V9 234 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 GALP22466 123 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 PPIBP23284 216 aaKnown RBP9.2□□□□□ -0.94
RTN3-204ENST00000354497 AZGP1P25311 298 aaKnown RBP9.2□□□□□ -0.94
RTN3-204ENST00000354497 FGF9P31371 208 aaPredicted RBP9.2□□□□□ -0.94
RTN3-204ENST00000354497 PSMB10P40306 273 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 INPP1P49441 399 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 DAPP51397 102 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 MLLT11Q13015 90 aaPredicted RBP9.2□□□□□ -0.94
RTN3-204ENST00000354497 HAGHQ16775 308 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 FAM74A1Q5RGS3 127 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 OAFQ86UD1 273 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 MSRB3Q8IXL7 192 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 BPIFCQ8NFQ6 507 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 OR4D11Q8NGI4 311 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 OR4C13Q8NGP0 309 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 THAP6Q8TBB0 222 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 WWC2-AS2Q96NR7 200 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 ALG12Q9BV10 488 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 TXNIPQ9H3M7 391 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 WDR76Q9H967 626 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 SLC25A19Q9HC21 320 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 SMCO4Q9NRQ5 59 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 TMEM100Q9NV29 134 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 LSM2Q9Y333 95 aaKnown RBP9.2□□□□□ -0.94
RTN3-204ENST00000354497 V9GYQ6 96 aa9.2□□□□□ -0.94
RTN3-204ENST00000354497 PLXNB1O43157 2135 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OR6C68A6NDL8 312 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 H7C1C5 153 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OR10H3O60404 316 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 HOXB5P09067 269 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 NCK1P16333 377 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 HOXB9P17482 250 aaPredicted RBP9.19□□□□□ -0.94
RTN3-204ENST00000354497 HOXA5P20719 270 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 GNG10P50151 68 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 MECP2P51608 486 aaKnown RBP9.19□□□□□ -0.94
RTN3-204ENST00000354497 LCN6P62502 163 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 TNFRSF9Q07011 255 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 LY6EQ16553 131 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 ALG10Q5BKT4 473 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OTPQ5XKR4 325 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OR2T5Q6IEZ7 315 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 SYT9Q86SS6 491 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 SERPINA12Q8IW75 414 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 GPR32P1Q8NGA4 272 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OR5L1Q8NGL2 311 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OR2T35Q8NGX2 323 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 OR2T29Q8NH02 315 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 MAFIPQ8WZ33 124 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 ZNF583Q96ND8 569 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 TMEM38AQ9H6F2 299 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 SIRT7Q9NRC8 400 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 SLAMF8Q9P0V8 285 aa9.19□□□□□ -0.94
RTN3-204ENST00000354497 A0A0U1RQV5 110 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 A0A1W2PPQ1 181 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 FAM220BPB1ANY3 271 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 K7EIL1 84 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 RPP14O95059 124 aaKnown RBP9.18□□□□□ -0.94
RTN3-204ENST00000354497 FSTL3O95633 263 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 GYPAP02724 150 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 DBHP09172 617 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 OR8U8P0C7N1 319 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 ZNF44P15621 663 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 CXCL2P19875 107 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 C21orf33P30042 268 aaPredicted RBP9.18□□□□□ -0.94
RTN3-204ENST00000354497 MNDAP41218 407 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 EFNB2P52799 333 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 RPL27P61353 136 aaKnown RBP9.18□□□□□ -0.94
RTN3-204ENST00000354497 CD69Q07108 199 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 FABP9Q0Z7S8 132 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 PDZK1IP1Q13113 114 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 FOXL2NBQ6ZUU3 175 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 TMEM179BQ7Z7N9 219 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 TGIF2LXQ8IUE1 241 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 PROKR2Q8NFJ6 384 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 OR5R1Q8NH85 324 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 OR2T6Q8NHC8 308 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 TMEM255BQ8WV15 326 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 TMEM203Q969S6 136 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 RASD2Q96D21 266 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 PYURFQ96I23 114 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 PRSS27Q9BQR3 290 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 CPPED1Q9BRF8 314 aaPredicted RBP9.18□□□□□ -0.94
RTN3-204ENST00000354497 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 RIMS4Q9H426 269 aaPredicted RBP9.18□□□□□ -0.94
RTN3-204ENST00000354497 IKZF5Q9H5V7 419 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 C20orf141Q9NUB4 165 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 VNN3Q9NY84 501 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 VAPAQ9P0L0 249 aa9.18□□□□□ -0.94
RTN3-204ENST00000354497 RNF7Q9UBF6 113 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms