RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PMP2P02689 132 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 PPP3CBP16298 524 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 TUBG1P23258 451 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 KIR2DL2P43627 348 aaPredicted RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 SNU13P55769 128 aaKnown RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 GRK1Q15835 563 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 GABRA6Q16445 453 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 SRSF7Q16629 238 aaKnown RBP eCLIP6.96□□□□□ -1.3
CD44-205ENST00000352818 Q6ZS49 121 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 OVCH2Q7RTZ1 564 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 TMED4Q7Z7H5 227 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 LINC00596Q86U02 117 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 MDP1Q86V88 176 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 ZNF611Q8N823 705 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 OR5AP2Q8NGF4 316 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 OR5M8Q8NGP6 311 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 OR51F2Q8NH61 342 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 MBD3L2Q8NHZ7 208 aaPredicted RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 MITD1Q8WV92 249 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 TRIB1Q96RU8 372 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 DHRS9Q9BPW9 319 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 PAPOLGQ9BWT3 736 aaKnown RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 PKIBQ9C010 78 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 FGF23Q9GZV9 251 aaPredicted RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 PPA2Q9H2U2 334 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 PLK3Q9H4B4 646 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 TUBG2Q9NRH3 451 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 PLEKHJ1Q9NW61 149 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 SHPKQ9UHJ6 478 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 GPR132Q9UNW8 380 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 STARD10Q9Y365 291 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 YLPM1P49750 1951 aaKnown RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 PLSCR5A0PG75 271 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 C9orf170A2RU37 121 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 ANGPTL7O43827 346 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 SLC22A5O76082 557 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 DUS4LO95620 317 aaKnown RBP6.95□□□□□ -1.3
CD44-205ENST00000352818 NGFP01138 241 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 HLA-AP01891 365 aaKnown RBP6.95□□□□□ -1.3
CD44-205ENST00000352818 CSN2P05814 226 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 SFTPBP07988 381 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 SOD3P08294 240 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 FCGR3AP08637 254 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 ZNF35P13682 527 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 CBR1P16152 277 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 SELEP16581 610 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 GABRR1P24046 479 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 CD34P28906 385 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 OR3A3P47888 321 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 H2BFSP57053 126 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 UBE2NP61088 152 aaKnown RBP6.95□□□□□ -1.3
CD44-205ENST00000352818 FGF12P61328 243 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 GNG3P63215 75 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 LOXL1Q08397 574 aaPredicted RBP6.95□□□□□ -1.3
CD44-205ENST00000352818 FAM27E3Q08E93 113 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 PPP1R1AQ13522 171 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 IL13RA2Q14627 380 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 MPV17LQ2QL34 196 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 TMEM128Q5BJH2 165 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 DMRTC1Q5HYR2 192 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 LY6G6FQ5SQ64 297 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 C1QTNF12Q5T7M4 302 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 RFPL4BQ6ZWI9 263 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 C6orf201Q7Z4U5 140 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 MKXQ8IYA7 352 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 C1orf174Q8IYL3 243 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 FBXL14Q8N1E6 418 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 FAM169BQ8N8A8 192 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 C9orf106Q8NAJ2 232 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 OR10AD1Q8NGE0 317 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 OR13G1Q8NGZ3 307 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 OR5P3Q8WZ94 311 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 PHB2Q99623 299 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 CMSS1Q9BQ75 279 aaKnown RBP6.95□□□□□ -1.3
CD44-205ENST00000352818 IFT22Q9H7X7 185 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 CHODLQ9H9P2 273 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 FN3KRPQ9HA64 309 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 PLSCR4Q9NRQ2 329 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 DECR2Q9NUI1 292 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
CD44-205ENST00000352818 ANXA10Q9UJ72 324 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 LAMP3Q9UQV4 416 aa6.95□□□□□ -1.3
CD44-205ENST00000352818 RYR1P21817 5038 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 DNAH1Q9P2D7 4330 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 DOCK7Q96N67 2140 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 DBX1A6NMT0 343 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 ANKRD30BLA7E2S9 258 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 POM121CA8CG34 1229 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 A8MXE2 369 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 J3QT63 122 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 MSTNO14793 375 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
CD44-205ENST00000352818 TNFSF13O75888 250 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 CGAP01215 116 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 IGKV3-15P01624 115 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 GLAP06280 429 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 CCL2P13500 99 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 RAC2P15153 192 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms