RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CTXN2P0C2S0 81 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 TBC1D26Q86UD7 250 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 ZFP62Q8NB50 900 aaPredicted RBP18.94■□□□□ 0.62
UPF3A-201ENST00000351487 FER1L6-AS2Q96M78 137 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 SPACA1Q9HBV2 294 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 NDRG3Q9UGV2 375 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 MPC1Q9Y5U8 109 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 ATP23Q9Y6H3 246 aa18.94■□□□□ 0.62
UPF3A-201ENST00000351487 OR5B21A6NL26 309 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 SYNGR1O43759 233 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 SPP1P10451 314 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 SWI5Q1ZZU3 235 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 TMEM88Q6PEY1 159 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 HAGHLQ6PII5 290 aaPredicted RBP18.93■□□□□ 0.62
UPF3A-201ENST00000351487 CLEC9AQ6UXN8 241 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 RIMS4Q9H426 269 aaPredicted RBP18.93■□□□□ 0.62
UPF3A-201ENST00000351487 FAM157AC9JC47 383 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 DANCRP0C864 163 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 WNT5AP41221 380 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 ZNF565Q8N9K5 539 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 PRSS50Q9UI38 385 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 KNTC1P50748 2209 aa18.93■□□□□ 0.62
UPF3A-201ENST00000351487 TRBV6-6A0A0A6YYG2 114 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 SLC22A20A6NK97 555 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 ANKRD30BLA7E2S9 258 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 M0R296 226 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 IL18BPO95998 194 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 SFTA3P0C7M3 94 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 APLNRP35414 380 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 DVL1P1P54792 670 aaPredicted RBP18.92■□□□□ 0.62
UPF3A-201ENST00000351487 CLN3Q13286 438 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 GNMTQ14749 295 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 TSC22D1Q15714 1073 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 HFEQ30201 348 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 ZNF818PQ6ZRF7 136 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 OR1K1Q8NGR3 316 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 SECTM1Q8WVN6 248 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 SPIN2AQ99865 258 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 SPIN2BQ9BPZ2 258 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 LIPGQ9Y5X9 500 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 DUXBA0A1W2PPF3 345 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 F12P00748 615 aaPredicted RBP18.92■□□□□ 0.62
UPF3A-201ENST00000351487 OR8U9P0C7N5 309 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 PRKACAP17612 351 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 IL32P24001 234 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 NPBWR1P48145 328 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 NOVA1P51513 510 aaKnown RBP18.92■□□□□ 0.62
UPF3A-201ENST00000351487 SLC10A1Q14973 349 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 ZNF573Q86YE8 665 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 OR8U1Q8NH10 309 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 BOD1Q96IK1 185 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 ABHD14BQ96IU4 210 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 LHX6Q9UPM6 363 aa18.92■□□□□ 0.62
UPF3A-201ENST00000351487 UBE2J1Q9Y385 318 aaPredicted RBP18.92■□□□□ 0.62
UPF3A-201ENST00000351487 IGKV1-6A0A0C4DH72 117 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 NKX2-6A6NCS4 301 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 ID4P47928 161 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 GNG3P63215 75 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 FLI1Q01543 452 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-201ENST00000351487 CBLN2Q8IUK8 224 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 COMMD1Q8N668 190 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 NEK7Q8TDX7 302 aa18.91■□□□□ 0.62
UPF3A-201ENST00000351487 IGKV1D-13A0A0B4J2D9 117 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 IGKV1-13P0DP09 117 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 UCP2P55851 309 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 IL24Q13007 206 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 SPIN3Q5JUX0 258 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 C5orf24Q7Z6I8 188 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 ZNF695Q8IW36 515 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 SELENOHQ8IZQ5 122 aaKnown RBP18.9■□□□□ 0.62
UPF3A-201ENST00000351487 GAPTQ8N292 157 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 SUMF2Q8NBJ7 301 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 MRPL30Q8TCC3 161 aaKnown RBP18.9■□□□□ 0.62
UPF3A-201ENST00000351487 PRELID1Q9Y255 219 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 WDFY4Q6ZS81 3184 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 CLEC18AA5D8T8 446 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 LILRA1O75019 489 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 TNFSF15O95150 251 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 UCP1P25874 307 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 CD80P33681 288 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 RAB5CP51148 216 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 HIKESHIQ53FT3 197 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 DHRS13Q6UX07 377 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 CLEC18CQ8NCF0 446 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 NANOS1Q8WY41 292 aaKnown RBP18.9■□□□□ 0.62
UPF3A-201ENST00000351487 BCL2L2Q92843 193 aaPredicted RBP18.9■□□□□ 0.62
UPF3A-201ENST00000351487 PKIBQ9C010 78 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 DOCK7Q96N67 2140 aa18.9■□□□□ 0.62
UPF3A-201ENST00000351487 HSPB6O14558 160 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 AGPAT2O15120 278 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 HEXAP06865 529 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 CD46P15529 392 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 EWSR1Q01844 656 aaKnown RBP eCLIP18.89■□□□□ 0.61
UPF3A-201ENST00000351487 NHLH2Q02577 135 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 ESPL1Q14674 2120 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 FBXW9Q5XUX1 488 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 KIRREL1Q96J84 757 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 LUZP4Q9P127 313 aa18.89■□□□□ 0.61
UPF3A-201ENST00000351487 NKX2-1P43699 371 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-201ENST00000351487 HES3Q5TGS1 186 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms