RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 TREM2Q9NZC2 230 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 RALGAPA1Q6GYQ0 2036 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 IGHV3-13P01766 116 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 IGHV3-7P01780 117 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 PRR32B1ATL7 298 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 RAB5CP51148 216 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 BIN3Q9NQY0 253 aa16.8■□□□□ 0.28
RNF38-202ENST00000350199 ADAM10O14672 748 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 FGF12P61328 243 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 HLA-DRB3P79483 266 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 FOXO1Q12778 655 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 GABRA6Q16445 453 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 HFEQ30201 348 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 TMEM45BQ96B21 275 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 OR6C3Q9NZP0 311 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 GNG13Q9P2W3 67 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 TMEM255AQ5JRV8 349 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 COX5BP10606 129 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 RSPO4Q2I0M5 234 aaPredicted RBP16.79■□□□□ 0.28
RNF38-202ENST00000350199 FRZBQ92765 325 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 MRPL24Q96A35 216 aaKnown RBP16.79■□□□□ 0.28
RNF38-202ENST00000350199 SLC35E1Q96K37 410 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 RPS10-NUDT3A0A1W2PQS6 291 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 FAM24AA6NFZ4 105 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 OOEPA6NGQ2 149 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 CD3EP07766 207 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 RPS10P46783 165 aaKnown RBP16.79■□□□□ 0.28
RNF38-202ENST00000350199 GNB1P62873 340 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 KCNMB1Q16558 191 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 NTNG2Q96CW9 530 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 LINC00470Q9BZP3 86 aa16.79■□□□□ 0.28
RNF38-202ENST00000350199 CA11O75493 328 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 IL13RA2Q14627 380 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 ZNF837Q96EG3 531 aaPredicted RBP16.78■□□□□ 0.28
RNF38-202ENST00000350199 C20orf24Q9BUV8 137 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 OR2C3Q8N628 320 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 RAB40CQ96S21 281 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 TMEM14DPA8MWL7 114 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 NKX6-2Q9C056 277 aaPredicted RBP16.78■□□□□ 0.28
RNF38-202ENST00000350199 FBXL17Q9UF56 701 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 LHX4Q969G2 390 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.78■□□□□ 0.28
RNF38-202ENST00000350199 CACFD1Q9UGQ2 172 aa16.78■□□□□ 0.28
RNF38-202ENST00000350199 A0A087WV48 116 aa16.77■□□□□ 0.28
RNF38-202ENST00000350199 hADV38S2A0JD32 116 aa16.77■□□□□ 0.28
RNF38-202ENST00000350199 ZNF708P17019 499 aa16.77■□□□□ 0.28
RNF38-202ENST00000350199 RAB7AP51149 207 aa16.77■□□□□ 0.28
RNF38-202ENST00000350199 POLR2GP62487 172 aaKnown RBP eCLIP16.77■□□□□ 0.28
RNF38-202ENST00000350199 PINX1Q96BK5 328 aaKnown RBP16.77■□□□□ 0.28
RNF38-202ENST00000350199 OR2W1Q9Y3N9 320 aa16.77■□□□□ 0.28
RNF38-202ENST00000350199 MED12Q93074 2177 aa16.77■□□□□ 0.28
RNF38-202ENST00000350199 RPL35P42766 123 aaKnown RBP16.77■□□□□ 0.27
RNF38-202ENST00000350199 TMEM267Q0VDI3 215 aaPredicted RBP16.77■□□□□ 0.27
RNF38-202ENST00000350199 SEZ6L2Q6UXD5 910 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 S100A7AQ86SG5 101 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 TMEM123Q8N131 208 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 OR4A4PQ8NGN8 299 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 OR5C1Q8NGR4 320 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 DEPPQ9NTK1 212 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 RNF7Q9UBF6 113 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 UCNP55089 124 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 SOX7Q9BT81 388 aa16.77■□□□□ 0.27
RNF38-202ENST00000350199 LOC390937A0A1W2PQ73 354 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 SYNGR1O43759 233 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 EFNA2O43921 213 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 ERHP84090 104 aaKnown RBP16.76■□□□□ 0.27
RNF38-202ENST00000350199 HOXD4P09016 255 aaPredicted RBP16.76■□□□□ 0.27
RNF38-202ENST00000350199 BTNL3Q6UXE8 466 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 RGS13O14921 159 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 TMPRSS2O15393 492 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 CBR1P16152 277 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 VDAC1P21796 283 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 TAGLN2P37802 199 aaKnown RBP16.76■□□□□ 0.27
RNF38-202ENST00000350199 PHYHD1Q5SRE7 291 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 DCAF12L2Q5VW00 463 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 LYZL2Q7Z4W2 148 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 SMCO4Q9NRQ5 59 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 DOCK9Q9BZ29 2069 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 UBE2L5PA0A1B0GUS4 154 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 TMEM33P57088 247 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 GAL3ST2Q9H3Q3 398 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 SAP30LQ9HAJ7 183 aa16.76■□□□□ 0.27
RNF38-202ENST00000350199 MRPS18CQ9Y3D5 142 aaKnown RBP16.76■□□□□ 0.27
RNF38-202ENST00000350199 COX5AP20674 150 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 PHYHIPLQ96FC7 376 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 TRAV38-1A0A0B4J264 116 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 UMAD1C9J7I0 102 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 CEACAM1P13688 526 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 HOXB1P14653 301 aaPredicted RBP16.75■□□□□ 0.27
RNF38-202ENST00000350199 AESQ08117 197 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 ZNF787Q6DD87 383 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 RNF122Q9H9V4 155 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 RHOFQ9HBH0 211 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 RPH3ALQ9UNE2 315 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 SYNGR3O43761 229 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 CHRNB4P30926 498 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 TNFSF10P50591 281 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 ADIRFQ15847 76 aa16.75■□□□□ 0.27
RNF38-202ENST00000350199 RPL7L1Q6DKI1 246 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms