RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 FAM206AQ9NX38 181 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 NCOA6Q14686 2063 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 IGKV1-9A0A0C4DH69 117 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 ANKUB1A6NFN9 424 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 PRR18Q8N4B5 295 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 CDCA3Q99618 268 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 RPP25Q9BUL9 199 aaKnown RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 ANXA10Q9UJ72 324 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 PLPP3O14495 311 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 NUPR1O60356 82 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 CYB5R3P00387 301 aaPredicted RBP13.18□□□□□ -0.3
PTBP1-201ENST00000349038 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 EXTL1Q92935 676 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 ADGRG7Q96K78 797 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 TMEM204Q9BSN7 226 aa13.18□□□□□ -0.3
PTBP1-201ENST00000349038 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 E9PLN8 166 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 IFNA5P01569 189 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 HSD11B2P80365 405 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 PIGYQ3MUY2 71 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 FAM78BQ5VT40 261 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 OR10S1Q8NGN2 331 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 GATAD1Q8WUU5 269 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 ATP5SQ99766 215 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 TNFRSF10CO14798 259 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
PTBP1-201ENST00000349038 IL33O95760 270 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 TGFBR3Q03167 851 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 MMDQ15546 238 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 OR8G2PQ6IF36 304 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 OR4F5Q8NH21 305 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 LPAR2Q9HBW0 351 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 PIGLQ9Y2B2 252 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 AHCTF1Q8WYP5 2266 aa13.17□□□□□ -0.3
PTBP1-201ENST00000349038 A0A1B0GU03 582 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 CD82P27701 267 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 KRTDAPP60985 99 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 ENDOGQ14249 297 aaKnown RBP13.16□□□□□ -0.3
PTBP1-201ENST00000349038 TMEM187Q14656 261 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 ATOH7Q8N100 152 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 BTF3L4Q96K17 158 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 IMMP2LQ96T52 175 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 SLC25A22Q9H936 323 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 BLACEA4D250 179 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 TK1P04183 234 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 HSF1Q00613 529 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 SLC35E3Q7Z769 313 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
PTBP1-201ENST00000349038 RBMXL1Q96E39 390 aaKnown RBP13.16□□□□□ -0.3
PTBP1-201ENST00000349038 SAMD10Q9BYL1 202 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 TUBD1Q9UJT1 453 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
PTBP1-201ENST00000349038 LCATP04180 440 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 ISG15P05161 165 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 CTSDP07339 412 aaPredicted RBP13.16□□□□□ -0.3
PTBP1-201ENST00000349038 RAB4AP20338 218 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 UBE2G2P60604 165 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 HNRNPKP61978 463 aaKnown RBP eCLIP13.16□□□□□ -0.31e-6■■■■□ 21.7
PTBP1-201ENST00000349038 OR1L6Q8NGR2 347 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 LHX4Q969G2 390 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 ZNF286AQ9HBT8 521 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
PTBP1-201ENST00000349038 OPN1MWP04001 364 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 HSPB1P04792 205 aaKnown RBP13.15□□□□□ -0.3
PTBP1-201ENST00000349038 OPN1MW2P0DN77 364 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 OPN1MW3P0DN78 364 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 ZNF43P17038 809 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 SLC37A2Q8TED4 501 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 TMEM50AO95807 157 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 CRYAAP02489 173 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 CTSEP14091 401 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 COL9A1P20849 921 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 GUCA1AP43080 201 aaPredicted RBP13.15□□□□□ -0.3
PTBP1-201ENST00000349038 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
PTBP1-201ENST00000349038 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 BEND2Q8NDZ0 799 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 RNF133Q8WVZ7 376 aa13.15□□□□□ -0.3
PTBP1-201ENST00000349038 C1orf147Q96MC9 270 aaPredicted RBP13.15□□□□□ -0.3
PTBP1-201ENST00000349038 AADACP22760 399 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms