RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GCNT2Q8N0V5 402 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 FLVCR1-AS1Q8TAF5 88 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 LHFPL6Q9Y693 200 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 LOC101059948A0A1B0GTJ6 334 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 NKX2-6A6NCS4 301 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 PHOX2AO14813 284 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 ZNF17P17021 662 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 EDDM3AQ14507 147 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 MAP1LC3B2A6NCE7 125 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 PMP22Q01453 160 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 IGSF11Q5DX21 431 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 PRAMEF5Q5TYX0 476 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 PRAMEF6Q5VXH4 476 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 MAP1LC3BQ9GZQ8 125 aa12.88□□□□□ -0.35
NUP50-201ENST00000347635 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 C17orf51A8MQB3 221 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 FCGR3AP08637 254 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 PNRC1Q12796 327 aaPredicted RBP12.87□□□□□ -0.35
NUP50-201ENST00000347635 UNC119Q13432 240 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 ZNF574Q6ZN55 896 aaPredicted RBP12.87□□□□□ -0.35
NUP50-201ENST00000347635 FBXO17Q96EF6 278 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 CARHSP1Q9Y2V2 147 aaKnown RBP12.87□□□□□ -0.35
NUP50-201ENST00000347635 A0A1B0GTI1 187 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 ZNF154Q13106 437 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 OR10V1Q8NGI7 309 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 OR10D3Q8NH80 312 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 MTCL1Q9Y4B5 1905 aaKnown RBP12.87□□□□□ -0.35
NUP50-201ENST00000347635 HEXAP06865 529 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 FOXL2P58012 376 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 GAPTQ8N292 157 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 TIMD4Q96H15 378 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 CHST1O43916 411 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 NHLH2Q02577 135 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 LY6G6FQ5SQ64 297 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 SLC25A47Q6Q0C1 308 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 POC1AQ8NBT0 407 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 SIRT7Q9NRC8 400 aa12.87□□□□□ -0.35
NUP50-201ENST00000347635 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 IGKV3-11P04433 115 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 VDAC1P21796 283 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 GNG3P63215 75 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 SLC38A11Q08AI6 406 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 ZNF816Q0VGE8 651 aaPredicted RBP12.86□□□□□ -0.35
NUP50-201ENST00000347635 TMEM241Q24JQ0 296 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 C22orf15Q8WYQ4 148 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 B4DEV8 164 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 PITX3O75364 302 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 IGFBP3P17936 291 aaPredicted RBP12.86□□□□□ -0.35
NUP50-201ENST00000347635 GALR1P47211 349 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
NUP50-201ENST00000347635 TAAR6Q96RI8 345 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 ZNF737O75373 536 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
NUP50-201ENST00000347635 UCN2Q96RP3 112 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 SMDT1Q9H4I9 107 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 SNCAP37840 140 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 FAM58AQ8N1B3 248 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 ATP23Q9Y6H3 246 aa12.86□□□□□ -0.35
NUP50-201ENST00000347635 MELTFP08582 738 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 SLC25A6P12236 298 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 PAX6P26367 422 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 ZNF90Q03938 601 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 GALMQ96C23 342 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 BCL3P20749 454 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 THBS3P49746 956 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 EDDM3BP56851 147 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 FOXO1Q12778 655 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 ABHD5Q8WTS1 349 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 MASP2O00187 686 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 EIF3GO75821 320 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUP50-201ENST00000347635 GPR12P47775 334 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 TMEM50BP56557 158 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 ZNF385AQ96PM9 386 aaKnown RBP12.85□□□□□ -0.35
NUP50-201ENST00000347635 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 ZNF320A2RRD8 509 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 OPN1MWP04001 364 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 OPN1MW2P0DN77 364 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 OPN1MW3P0DN78 364 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 SPATA46Q5T0L3 261 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
NUP50-201ENST00000347635 AUP1Q9Y679 476 aa12.85□□□□□ -0.35
NUP50-201ENST00000347635 IGHV1-45A0A0A0MS14 117 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 A0A1W2PQM1 296 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 HSBP1L1C9JCN9 74 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 HNF1AP20823 631 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 MDH2P40926 338 aaKnown RBP12.84□□□□□ -0.35
NUP50-201ENST00000347635 NSUN5P2Q63ZY6 315 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 SLC25A28Q96A46 364 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 OR2H1Q9GZK4 316 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 PQLC2LA1A4F0 135 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 NPIPB13A6NJU9 1138 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 NPIPB4C9JG80 1138 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 CEACAM6P40199 344 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms