RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 USP9XQ93008 2570 aaPredicted RBP9.21□□□□□ -0.93
ECM1-201ENST00000346569 ABCA4P78363 2273 aa9.21□□□□□ -0.93
ECM1-201ENST00000346569 UTP20O75691 2785 aaKnown RBP9.21□□□□□ -0.94
ECM1-201ENST00000346569 IGKV1D-17A0A075B6S4 117 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 A0A0A6YYJ9 748 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 TMEM82A0PJX8 343 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 HMX3A6NHT5 357 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 OR2AT4A6NND4 320 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 SIRPB1O00241 398 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 SDCBPO00560 298 aaPredicted RBP9.21□□□□□ -0.94
ECM1-201ENST00000346569 ARPC1BO15143 372 aaKnown RBP9.21□□□□□ -0.94
ECM1-201ENST00000346569 PFDN1O60925 122 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 IFNA6P05013 189 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 CSN2P05814 226 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 MDH2P40926 338 aaKnown RBP9.21□□□□□ -0.94
ECM1-201ENST00000346569 OR3A3P47888 321 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 CEBPDP49716 269 aaPredicted RBP9.21□□□□□ -0.94
ECM1-201ENST00000346569 CDK10Q15131 360 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 CARTPTQ16568 116 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 PAN3Q58A45 887 aaKnown RBP9.21□□□□□ -0.94
ECM1-201ENST00000346569 ZNF497Q6ZNH5 498 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 MUC15Q8N387 334 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 CD177Q8N6Q3 437 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 EGLN1Q9GZT9 426 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 PPA2Q9H2U2 334 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 ZNF286AQ9HBT8 521 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 DECR2Q9NUI1 292 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 OR14J1Q9UGF5 321 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 ZNF222Q9UK12 451 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 NPTNQ9Y639 398 aa9.21□□□□□ -0.94
ECM1-201ENST00000346569 ARFGEF3Q5TH69 2177 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 A0A1W2PPR1 153 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 CLEC18AA5D8T8 446 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 PRAF2O60831 178 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 ZNF737O75373 536 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 CD8AP01732 235 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 HPXP02790 462 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 GSTT2P0CG29 244 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 KCNJ3P48549 501 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 PAX5Q02548 391 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 COL10A1Q03692 680 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 CHRFAM7AQ494W8 412 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 FAM201AQ5SY85 155 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 AADACL3Q5VUY0 350 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 TEX36Q5VZQ5 186 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 CLEC18BQ6UXF7 455 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 C5orf24Q7Z6I8 188 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 ZDHHC22Q8N966 263 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 CLEC18CQ8NCF0 446 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 OR5T2Q8NGG2 359 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 ANGPTL6Q8NI99 470 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 NEK7Q8TDX7 302 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 PPP1R14BQ96C90 147 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 LIME1Q9H400 295 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 MBNL3Q9NUK0 354 aaKnown RBP9.2□□□□□ -0.94
ECM1-201ENST00000346569 DCAF16Q9NXF7 216 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 GPR132Q9UNW8 380 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 VSIG4Q9Y279 399 aa9.2□□□□□ -0.94
ECM1-201ENST00000346569 PKDREJQ9NTG1 2253 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 CACNA1DQ01668 2161 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 TRDCB7Z8K6 153 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 TMEM178BH3BS89 294 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 H7C1Q1 480 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 HSPB6O14558 160 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 TNFRSF13BO14836 293 aaPredicted RBP9.19□□□□□ -0.94
ECM1-201ENST00000346569 CYB5R3P00387 301 aaPredicted RBP9.19□□□□□ -0.94
ECM1-201ENST00000346569 TFF1P04155 84 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 DANCRP0C864 163 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 TRAPPC2P0DI81 140 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 TRAPPC2BP0DI82 140 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 OR5H8P0DN80 308 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 VSIG10L2P0DP72 767 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 RCC1P18754 421 aaPredicted RBP9.19□□□□□ -0.94
ECM1-201ENST00000346569 TSPAN5P62079 268 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 SCGB2B2Q4G0G5 96 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 ATPAF1Q5TC12 328 aaPredicted RBP9.19□□□□□ -0.94
ECM1-201ENST00000346569 SLC35E4Q6ICL7 350 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 C11orf71Q6IPW1 123 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 GLDNQ6ZMI3 551 aaPredicted RBP9.19□□□□□ -0.94
ECM1-201ENST00000346569 TMEM17Q86X19 198 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 OR11L1Q8NGX0 322 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 OR6F1Q8NGZ6 308 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 GIMAP1Q8WWP7 306 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 SNX22Q96L94 193 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 SAP30LQ9HAJ7 183 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 NECAP2Q9NVZ3 263 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 EHFQ9NZC4 300 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 MAB21L2Q9Y586 359 aa9.19□□□□□ -0.94
ECM1-201ENST00000346569 USP9YO00507 2555 aaPredicted RBP9.18□□□□□ -0.94
ECM1-201ENST00000346569 DYSFO75923 2080 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 IGHV3OR15-7A0A075B7D8 119 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 IGKV1-6A0A0C4DH72 117 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 OR5H14A6NHG9 310 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 SCTP09683 121 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 RNF224P0DH78 156 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 MUC1P15941 1255 aaPredicted RBP9.18□□□□□ -0.94
ECM1-201ENST00000346569 ANXA7P20073 488 aaKnown RBP9.18□□□□□ -0.94
ECM1-201ENST00000346569 CD80P33681 288 aa9.18□□□□□ -0.94
ECM1-201ENST00000346569 OR3A1P47881 315 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms