RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LINC00052Q96N35 136 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 Q9N2K0 584 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 J3KRW8 73 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 NPY1RP25929 384 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 HLA-DRB3P79483 266 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 DCAF10Q5QP82 559 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 HARBI1Q96MB7 349 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 CBY3A6NI87 242 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 CD40P25942 277 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 PSG5Q15238 335 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 COX19Q49B96 90 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 HIKESHIQ53FT3 197 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 TRPM3Q9HCF6 1732 aaPredicted RBP20.32■□□□□ 0.84
NPAS3-201ENST00000346562 RGS13O14921 159 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 CIDEAO60543 219 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 THSD4Q6ZMP0 1018 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 M0R2Z0 102 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 GEMIN2O14893 280 aaKnown RBP20.31■□□□□ 0.84
NPAS3-201ENST00000346562 ZNF207O43670 478 aaKnown RBP20.31■□□□□ 0.84
NPAS3-201ENST00000346562 INSL4Q14641 139 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 MSRB3Q8IXL7 192 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 PRF1P14222 555 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 GPR6P46095 362 aaPredicted RBP20.31■□□□□ 0.84
NPAS3-201ENST00000346562 TMEM38BQ9NVV0 291 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 RD3LP0DJH9 198 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 CCL3P10147 92 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 C12orf57Q99622 126 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 DEDDO75618 318 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 LIFP15018 202 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 PNLIPP16233 465 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 OR8I2Q8N0Y5 310 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 ZG16BQ96DA0 208 aa20.31■□□□□ 0.84
NPAS3-201ENST00000346562 ARG1P05089 322 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 FBXW9Q5XUX1 488 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 MS4A10Q96PG2 267 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 MRPL37Q9BZE1 423 aaKnown RBP20.3■□□□□ 0.84
NPAS3-201ENST00000346562 HOXD4P09016 255 aaPredicted RBP20.3■□□□□ 0.84
NPAS3-201ENST00000346562 OR4P4Q8NGL7 312 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 ZNF552Q9H707 407 aaPredicted RBP20.3■□□□□ 0.84
NPAS3-201ENST00000346562 SLC25A10Q9UBX3 287 aaPredicted RBP20.3■□□□□ 0.84
NPAS3-201ENST00000346562 POLR2GP62487 172 aaKnown RBP eCLIP20.3■□□□□ 0.84
NPAS3-201ENST00000346562 CD226Q15762 336 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 GVQW1Q8N7I0 195 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 C17orf47Q8NEP4 570 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 FAM210BQ96KR6 192 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 ZFP36L2P47974 494 aaKnown RBP20.3■□□□□ 0.84
NPAS3-201ENST00000346562 Q6ZN92 141 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 OR4X1Q8NH49 305 aa20.3■□□□□ 0.84
NPAS3-201ENST00000346562 STXBP6Q8NFX7 210 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 OR5A2Q8NGI9 324 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 C5orf67F2Z3F1 127 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 GABRA6Q16445 453 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 CLEC2AQ6UVW9 174 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 GAPTQ8N292 157 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 ITGB4P16144 1822 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 PPIAL4EA0A075B759 164 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 C5orf52A6NGY3 159 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 PPIAL4DF5H284 164 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 CA11O75493 328 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 ZNF205O95201 554 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 PPIAL4FP0DN26 164 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 KCNK15Q9H427 330 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 PPIAL4AQ9Y536 164 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 KIR3DL2P43630 455 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 PNRC1Q12796 327 aaPredicted RBP20.29■□□□□ 0.84
NPAS3-201ENST00000346562 KIF13AQ9H1H9 1805 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 RBFOX3A6NFN3 312 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 MFSD2BA6NFX1 497 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 C11orf94C9JXX5 98 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 PPOXP50336 477 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 ERVFRD-1P60508 538 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 TTTY12Q9BZ98 90 aa20.29■□□□□ 0.84
NPAS3-201ENST00000346562 IGHV3OR15-7A0A075B7D8 119 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 MFNGO00587 321 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 COL13A1Q5TAT6 717 aaPredicted RBP20.28■□□□□ 0.84
NPAS3-201ENST00000346562 WFDC3Q8IUB2 231 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 CDC42EP2O14613 210 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 HPXP02790 462 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 ABHD3Q8WU67 409 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 RNF122Q9H9V4 155 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 CTDSPLO15194 276 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 IGKV3-7A0A075B6H7 116 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 COL8A1P27658 744 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 SCGB1D4Q6XE38 83 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 TMEM33P57088 247 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 MMDQ15546 238 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 SNRNP40Q96DI7 357 aaKnown RBP20.28■□□□□ 0.84
NPAS3-201ENST00000346562 PCGF1Q9BSM1 259 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
NPAS3-201ENST00000346562 ANKRD12Q6UB98 2062 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 SYNGR1O43759 233 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 VDAC1P21796 283 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 PRSS12P56730 875 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 NAAAQ02083 359 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 DMKNQ6E0U4 476 aaPredicted RBP20.27■□□□□ 0.84
NPAS3-201ENST00000346562 OR1L8Q8NGR8 309 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 MAP1LC3CQ9BXW4 147 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 SLIRPQ9GZT3 109 aaKnown RBP20.27■□□□□ 0.84
NPAS3-201ENST00000346562 PMS2P11Q13670 270 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 SSX1Q16384 188 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms