RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SOX7Q9BT81 388 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 ELOVL1Q9BW60 279 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 TSC2P49815 1807 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 VWA8A3KMH1 1905 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 LOC101059948A0A1B0GTJ6 334 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 DBX2Q6ZNG2 339 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 ZNRF4Q8WWF5 429 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 GPR35Q9HC97 309 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 FLVCR1Q9Y5Y0 555 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 BRWD1Q9NSI6 2320 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 H3BMH7 237 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 ST8SIA3O43173 380 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 GDF9O60383 454 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 IL11P20809 199 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 RPL12P30050 165 aaKnown RBP9.53□□□□□ -0.88
CLCN6-202ENST00000346436 SLC25A38Q96DW6 304 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 IL19Q9UHD0 177 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 ICAM5Q9UMF0 924 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 C9orf170A2RU37 121 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 TMEM127O75204 238 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 PNPP00491 289 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 PSMB3P49720 205 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 TNXAQ16473 311 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 OR10V1Q8NGI7 309 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 MISP3Q96FF7 219 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 MAGT1Q9H0U3 335 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 TUBA4BQ9H853 241 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 IL17BQ9UHF5 180 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 PURGQ9UJV8 347 aaKnown RBP9.53□□□□□ -0.88
CLCN6-202ENST00000346436 MBP02144 154 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 ACKR3P25106 362 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 UBE2KP61086 200 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 OR5I1Q13606 314 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 CRIPAKQ8N1N5 446 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 SLC25A10Q9UBX3 287 aaPredicted RBP9.53□□□□□ -0.88
CLCN6-202ENST00000346436 KIR3DL2P43630 455 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 MRPS11P82912 194 aaKnown RBP9.53□□□□□ -0.88
CLCN6-202ENST00000346436 SCN5AQ14524 2016 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 PNLIPRP3Q17RR3 467 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 C4orf17Q53FE4 359 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 SLC22A18ASQ8N1D0 253 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 OR13C8Q8NGS7 320 aa9.53□□□□□ -0.88
CLCN6-202ENST00000346436 A0A087WV48 116 aa9.52□□□□□ -0.88
CLCN6-202ENST00000346436 RD3LP0DJH9 198 aa9.52□□□□□ -0.88
CLCN6-202ENST00000346436 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.88
CLCN6-202ENST00000346436 MUC15Q8N387 334 aa9.52□□□□□ -0.88
CLCN6-202ENST00000346436 GPX8Q8TED1 209 aa9.52□□□□□ -0.88
CLCN6-202ENST00000346436 FBXL17Q9UF56 701 aa9.52□□□□□ -0.88
CLCN6-202ENST00000346436 C20orf202A1L168 122 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 OR2B8PP59922 312 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 FAM57AQ8TBR7 257 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 ACY3Q96HD9 319 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 MSRB2Q9Y3D2 182 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 UNC13CQ8NB66 2214 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 MPC2O95563 127 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 S100A8P05109 93 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 OPRK1P41145 380 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 PIGPP57054 158 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 ZNF260Q3ZCT1 412 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.89
CLCN6-202ENST00000346436 CENPVQ7Z7K6 275 aaPredicted RBP9.52□□□□□ -0.89
CLCN6-202ENST00000346436 OR4S2Q8NH73 311 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 ANGPTL4Q9BY76 406 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 FOXJ2Q9P0K8 574 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 LMX1BO60663 402 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 ADAD2Q8NCV1 583 aaKnown RBP9.52□□□□□ -0.89
CLCN6-202ENST00000346436 FDCSPQ8NFU4 85 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 RNASE6Q93091 150 aaKnown RBP9.52□□□□□ -0.89
CLCN6-202ENST00000346436 SLC35D1Q9NTN3 355 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 ZNF835Q9Y2P0 537 aa9.52□□□□□ -0.89
CLCN6-202ENST00000346436 GPR31O00270 319 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 ARG1P05089 322 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 PATE4P0C8F1 98 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 CPN1P15169 458 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 LTBRP36941 435 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 HAGHQ16775 308 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 TMEM128Q5BJH2 165 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 C6orf201Q7Z4U5 140 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 ZNF275Q9NSD4 429 aaPredicted RBP9.51□□□□□ -0.89
CLCN6-202ENST00000346436 LIPT2A6NK58 231 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 SOCS1O15524 211 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 RAB32Q13637 225 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 LY6DQ14210 128 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 NRN1LQ496H8 165 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 TMEM255AQ5JRV8 349 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 ZFP62Q8NB50 900 aaPredicted RBP9.51□□□□□ -0.89
CLCN6-202ENST00000346436 OR2G3Q8NGZ4 309 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 A0A1W2PR77 199 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 GNG7O60262 68 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 KRASP01116 189 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 CLRN3Q8NCR9 226 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 OR4X2Q8NGF9 303 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 OR1L6Q8NGR2 347 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 ABHD3Q8WU67 409 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms