RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RIMS4Q9H426 269 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TUBG2Q9NRH3 451 aa11.99□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ATP23Q9Y6H3 246 aa11.99□□□□□ -0.49
CDK5RAP1-202ENST00000346416 CADP27708 2225 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KIR2DS1A0A191URI9 304 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TMEM210A6NLX4 147 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TRDCB7Z8K6 153 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TK1P04183 234 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 GLAP06280 429 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KIR2DS4P43632 304 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KIR2DS1Q14954 304 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 HERPUD1Q15011 391 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ALKAL2Q6UX46 152 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 SLC51BQ86UW2 128 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 CCDC28AQ8IWP9 274 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 S100PBPQ96BU1 408 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 C2orf50Q96LR7 162 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 VRK1Q99986 396 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 NAA60Q9H7X0 242 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KIF25Q9UIL4 384 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KCNIP3Q9Y2W7 256 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TIMM8AO60220 97 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 NXPH2O95156 264 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KITLGP21583 273 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 GCH1P30793 250 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ZNF718Q3SXZ3 478 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 SP6Q3SY56 376 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 BEX5Q5H9J7 111 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ALKBH2Q6NS38 261 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 COMMD7Q86VX2 200 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 GALNT14Q96FL9 552 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 RSRP1Q9BUV0 290 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 RNF126Q9BV68 326 aa11.98□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ZGRF1Q86YA3 2104 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KCNAB3O43448 404 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 B3GALNT1O75752 331 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 SPDEFO95238 335 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 OR2H2O95918 312 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 OR5AC1P0C628 307 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 CEACAM8P31997 349 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TIMM23BQ5SRD1 257 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 Q6ZR03 302 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 OR11L1Q8NGX0 322 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 SFXN3Q9BWM7 321 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 RASL12Q9NYN1 266 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 GSKIPQ9P0R6 139 aa11.97□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TRBV6-7A0A0A0MS04 114 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TRBV6-6A0A0A6YYG2 114 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 IGKV1-6A0A0C4DH72 117 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 KANTRA0A1W2PQU2 76 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 H0YIZ8 118 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 SIRPB1O00241 398 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 DIRAS3O95661 229 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 GLI4P10075 376 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 RRASP10301 218 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 RCC1P18754 421 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ZNF83P51522 516 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 NAAAQ02083 359 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 NHLH1Q02575 133 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TMEM187Q14656 261 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 ZNF146Q15072 292 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TBR1Q16650 682 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 PAN3Q58A45 887 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 TOR2AQ5JU69 321 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 MBNL2Q5VZF2 373 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 CISD2Q8N5K1 135 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 Q8NA96 180 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 DCUN1D4Q92564 292 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 SYT3Q9BQG1 590 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 MSL2Q9HCI7 577 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 PTPRQQ9UMZ3 2332 aa11.96□□□□□ -0.49
CDK5RAP1-202ENST00000346416 K7ENP7 123 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 HOXD4P09016 255 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CTXN2P0C2S0 81 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GNRHRP30968 328 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IL15RAQ13261 267 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RAB32Q13637 225 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FAM219AQ8IW50 185 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SCARB1Q8WTV0 552 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CXXC4Q9H2H0 198 aa11.96□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SLC33A1O00400 549 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 BCL2L11O43521 198 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TDGF1P3P51864 188 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IAH1Q2TAA2 248 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF880Q6PDB4 577 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C11orf53Q8IXP5 236 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CCDC71LQ8N9Z2 235 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SECTM1Q8WVN6 248 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MRPL24Q96A35 216 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MUCL1Q96DR8 90 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SUCNR1Q9BXA5 334 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MEMO1Q9Y316 297 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 M0R1B8 84 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SH2D1BO14796 132 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms