RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 LBX1P52954 281 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 OR2W5A6NFC9 320 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 WDR38Q5JTN6 314 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 DYSFO75923 2080 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 A0A096LPE4 126 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 LOC102724200A0A096LPH7 203 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 A0A1W2PPZ6 126 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 ASCL5Q7RTU5 278 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 YRDCQ86U90 279 aaKnown RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 OR8A1Q8NGG7 326 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 MED29Q9NX70 200 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 hADV38S2A0JD32 116 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 SPRY1O43609 319 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 NDUFB3O43676 98 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 IGHV3-9P01782 118 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 NFAM1Q8NET5 270 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 ERRFI1Q9UJM3 462 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 OR2W1Q9Y3N9 320 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 K7ESF4 209 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 HMGA2P52926 109 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 CYB5R2Q6BCY4 276 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 OR2V1Q8NHB1 315 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 TBC1D29Q9UFV1 150 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 ARG1P05089 322 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 LPAR6P43657 344 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 SPATA45Q537H7 98 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 SYNGR2O43760 224 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 PLPPR5Q32ZL2 321 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 CCSMST1Q4G0I0 132 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 ZNF764Q96H86 408 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-201ENST00000345617 CYB5R3P00387 301 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-201ENST00000345617 FAM157BP0CG42 384 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 FBXL6Q8N531 539 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 PARD6GQ9BYG4 376 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-201ENST00000345617 HBZP02008 142 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 CCL26Q9Y258 94 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 CACNA1HO95180 2353 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 IGLV3-27P01718 113 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 ZNF141Q15928 474 aa17.21■□□□□ 0.35
HDAC4-201ENST00000345617 SPINK4O60575 86 aa17.21■□□□□ 0.34
HDAC4-201ENST00000345617 CST9Q5W186 159 aa17.21■□□□□ 0.34
HDAC4-201ENST00000345617 OR4C12Q96R67 309 aa17.21■□□□□ 0.34
HDAC4-201ENST00000345617 NRSN2Q9GZP1 204 aa17.21■□□□□ 0.34
HDAC4-201ENST00000345617 PRNDQ9UKY0 176 aa17.21■□□□□ 0.34
HDAC4-201ENST00000345617 WDFY1Q8IWB7 410 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 DIRC2Q96SL1 478 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 SLC52A3Q9NQ40 469 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 NGFP01138 241 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 KIR3DL2P43630 455 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 SP6Q3SY56 376 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 V9GYH0 126 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
HDAC4-201ENST00000345617 ZNF770Q6IQ21 691 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-201ENST00000345617 MOB3BQ86TA1 216 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 TBC1D26Q86UD7 250 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 SPPL3Q8TCT6 385 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 DHHO43323 396 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 F11P03951 625 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 HOXA4Q00056 320 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-201ENST00000345617 GABRG3Q99928 467 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 GHRHP01286 108 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 RPEQ96AT9 228 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 C4orf45Q96LM5 186 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 TBX15Q96SF7 602 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 RASL11BQ9BPW5 248 aa17.2■□□□□ 0.34
HDAC4-201ENST00000345617 A8MWL6 223 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 KIRREL2Q6UWL6 708 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.19■□□□□ 0.34
HDAC4-201ENST00000345617 LIPFP07098 398 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 CSNK1EP49674 416 aaKnown RBP17.19■□□□□ 0.34
HDAC4-201ENST00000345617 TUSC5Q8IXB3 177 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 ABHD1Q96SE0 405 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 LILRA5A6NI73 299 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 SEMG1P04279 462 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 MMP16P51512 607 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 GAMTQ14353 236 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 BATF2Q8N1L9 274 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 ELSPBP1Q96BH3 223 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 SNURFLB1AK76 121 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 FAM209AQ5JX71 171 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 LGALS7P47929 136 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 SELENOPP49908 381 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 GABRA6Q16445 453 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 TMEM211Q6ICI0 200 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 OR1N1Q8NGS0 311 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 ZG16BQ96DA0 208 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 LPAR5Q9H1C0 372 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 IL19Q9UHD0 177 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 PPM1DO15297 605 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 SPNS3Q6ZMD2 512 aa17.19■□□□□ 0.34
HDAC4-201ENST00000345617 ALKBH3Q96Q83 286 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-201ENST00000345617 OR4C46A6NHA9 309 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 FCMRO60667 390 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 P2RX4Q99571 388 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 ONECUT1Q9UBC0 465 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 SIT1Q9Y3P8 196 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 CD82P27701 267 aa17.18■□□□□ 0.34
HDAC4-201ENST00000345617 ALX4Q9H161 411 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-201ENST00000345617 K7ESM1 405 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms