RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TRAPPC2LH3BP13 241 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 ARR3P36575 388 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 ASCL1P50553 236 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 SPIN3Q5JUX0 258 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 HES3Q5TGS1 186 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 MCEMP1Q8IX19 187 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 SAXO1Q8IYX7 474 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 C17orf78Q8N4C9 275 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 OR4D5Q8NGN0 318 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 NEK7Q8TDX7 302 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 PRKACAP17612 351 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 SPATA46Q5T0L3 261 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 Q6ZS49 121 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 DPPA2Q7Z7J5 298 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 GAPTQ8N292 157 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 SUMF1Q8NBK3 374 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 OR5P3Q8WZ94 311 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 SEC11CQ9BY50 192 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 TMEM222Q9H0R3 208 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 RNF122Q9H9V4 155 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 RNASEK-C17orf49H0YIS7 233 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 ST8SIA3O43173 380 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 FHITP49789 147 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 RNPS1Q15287 305 aaKnown RBP18.3■□□□□ 0.52
CCDC38-201ENST00000344280 TGIF1Q15583 401 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 PARP11Q9NR21 331 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 FBXO9Q9UK97 447 aaPredicted RBP18.3■□□□□ 0.52
CCDC38-201ENST00000344280 TMED3Q9Y3Q3 217 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 CFAP47Q6ZTR5 3102 aa18.3■□□□□ 0.52
CCDC38-201ENST00000344280 SLC22A20A6NK97 555 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 GPR137BO60478 399 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 TK1P04183 234 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 GLAP06280 429 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 CD80P33681 288 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 PLP2Q04941 152 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 FAM122CQ6P4D5 195 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 MED12LQ86YW9 2145 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 MKXQ8IYA7 352 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 OR5A2Q8NGI9 324 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 SH3BGRL3Q9H299 93 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 ARV1Q9H2C2 271 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 FAM86C1Q9NVL1 165 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 HS3ST1O14792 307 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 SFTA3P0C7M3 94 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 SLC10A1Q14973 349 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 OR2T2Q6IF00 324 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 SUMF2Q8NBJ7 301 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 POM121Q96HA1 1249 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 SPRR3Q9UBC9 169 aa18.29■□□□□ 0.52
CCDC38-201ENST00000344280 KLF13Q9Y2Y9 288 aaPredicted RBP18.29■□□□□ 0.52
CCDC38-201ENST00000344280 HSD17B6O14756 317 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 RHBDL1O75783 438 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 C1QL1O75973 258 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 CD5P06127 495 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 MYPOPQ86VE0 399 aaPredicted RBP18.28■□□□□ 0.52
CCDC38-201ENST00000344280 IL22RA1Q8N6P7 574 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 RDH5Q92781 318 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 HIST1H2AAQ96QV6 131 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 MED19A0JLT2 244 aaPredicted RBP18.28■□□□□ 0.52
CCDC38-201ENST00000344280 TRDCB7Z8K6 153 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 FAM157AC9JC47 383 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 KLRC4-KLRK1H3BQV0 150 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 TSPAN9O75954 239 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 IL32P24001 234 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 NFYBP25208 207 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 P2RY1P47900 373 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 F2RL1P55085 397 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 CLN3Q13286 438 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 MPV17LQ2QL34 196 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 ZFP62Q8NB50 900 aaPredicted RBP18.28■□□□□ 0.52
CCDC38-201ENST00000344280 CCL28Q9NRJ3 127 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 UBE2J1Q9Y385 318 aaPredicted RBP18.28■□□□□ 0.52
CCDC38-201ENST00000344280 POMT1Q9Y6A1 747 aa18.28■□□□□ 0.52
CCDC38-201ENST00000344280 TNFSF12O43508 249 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 CA6P23280 308 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 APLNRP35414 380 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 IL13RA2Q14627 380 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 MDP1Q86V88 176 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 OR1K1Q8NGR3 316 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 LILRB1Q8NHL6 650 aaPredicted RBP18.27■□□□□ 0.52
CCDC38-201ENST00000344280 LYPD6BQ8NI32 183 aa18.27■□□□□ 0.52
CCDC38-201ENST00000344280 TRAV24A0A0B4J272 114 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 ARGFXA6NJG6 315 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 TUSC2O75896 110 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 POLR2GP62487 172 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC38-201ENST00000344280 GPR157Q5UAW9 335 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 TMPRSS7Q7RTY8 843 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 SELENOHQ8IZQ5 122 aaKnown RBP18.26■□□□□ 0.51
CCDC38-201ENST00000344280 ZNF565Q8N9K5 539 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 HSD17B11Q8NBQ5 300 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 MRPL30Q8TCC3 161 aaKnown RBP18.26■□□□□ 0.51
CCDC38-201ENST00000344280 WDYHV1Q96HA8 205 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 TMEM56Q96MV1 263 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 RFNGQ9Y644 331 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 ATP23Q9Y6H3 246 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 TMEM56-RWDD3S4R434 201 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 A0A1W2PR80 420 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 SRSF7Q16629 238 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC38-201ENST00000344280 SWI5Q1ZZU3 235 aa18.26■□□□□ 0.51
CCDC38-201ENST00000344280 C11orf1Q9H5F2 150 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms