RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CHRNA7P36544 502 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 KMT5CQ86Y97 462 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 SLC25A45Q8N413 288 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 OR2V1Q8NHB1 315 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 FNDC1Q4ZHG4 1894 aaPredicted RBP10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF407Q9C0G0 2248 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 G3V3Q6 166 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 LINC00271P0C7V0 271 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 IL13RA2Q14627 380 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 GCNT2Q8N0V5 402 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 OR13D1Q8NGV5 346 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 ADAMTS17Q8TE56 1095 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 RSG1Q9BU20 258 aa10.84□□□□□ -0.67
SNRNP48-201ENST00000342415 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 SPINK4O60575 86 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 DEDDO75618 318 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 SSTP61278 116 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 H2BFWTQ7Z2G1 175 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 OR10V1Q8NGI7 309 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 DOCK10Q96BY6 2186 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 CER1O95813 267 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 NAT2P11245 290 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 KCNIP4Q6PIL6 250 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 BIVMQ86UB2 503 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 MYPOPQ86VE0 399 aaPredicted RBP10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 DEFB108BQ8NET1 73 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 OR4A4PQ8NGN8 299 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 POM121Q96HA1 1249 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 AQP10Q96PS8 301 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 EDEM2Q9BV94 578 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 IGHV3-43A0A0B4J1X8 118 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 SCTP09683 121 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 IGHV3-43DP0DP04 118 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 LSM6P62312 80 aaKnown RBP10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 RAC1P63000 192 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF92Q03936 586 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 BAGE3Q86Y29 109 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 BAGE2Q86Y30 109 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF383Q8NA42 475 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 OR10AD1Q8NGE0 317 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 TMEM100Q9NV29 134 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 FZR1Q9UM11 496 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
SNRNP48-201ENST00000342415 CLDN34H7C241 214 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 TRGC2P03986 189 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 BCL3P20749 454 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 G0S2P27469 103 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 P2RY1P47900 373 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 OR10P1Q8NGE3 313 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 MRGPRFQ96AM1 343 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 CLDN23Q96B33 292 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 A0A1B0GTI1 187 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 PATE3B3GLJ2 98 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 MMP7P09237 267 aaPredicted RBP10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 CTXN2P0C2S0 81 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 COMMD1Q8N668 190 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 SPSB2Q99619 263 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF320A2RRD8 509 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 CEACAM6P40199 344 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 NPBWR2P48146 333 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 HLA-DRB3P79483 266 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 H3F3AP84243 136 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 V9GYS6 101 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 CADP27708 2225 aa10.82□□□□□ -0.68
SNRNP48-201ENST00000342415 IGKV1D-8A0A087WSZ0 117 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 MDFIC2A0A1B0GVS7 189 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 IGFBP3P17936 291 aaPredicted RBP10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 TMEM252Q8N6L7 170 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 POC1AQ8NBT0 407 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 SMRP1Q8NCR6 262 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 MEGF10Q96KG7 1140 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 GPR61Q9BZJ8 451 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 STARD10Q9Y365 291 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 PIGBOS1A0A0B4J2F0 54 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 C5orf63A6NC05 138 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 AQP7O14520 342 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 KITLGP21583 273 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 ZP4Q12836 540 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 PRAMEF5Q5TYX0 476 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 PRAMEF6Q5VXH4 476 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF574Q6ZN55 896 aaPredicted RBP10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 OR4A16Q8NH70 328 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 MSL2Q9HCI7 577 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 ATXN7O15265 892 aaPredicted RBP10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF573Q86YE8 665 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 TMEM230Q96A57 120 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 RHOVQ96L33 236 aa10.81□□□□□ -0.68
SNRNP48-201ENST00000342415 FGF7P21781 194 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms