RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 C3orf36Q3SXR2 165 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 ZNF718Q3SXZ3 478 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 TMEM65Q6PI78 240 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 SLC7A5P1Q8MH63 180 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 PIK3IP1Q96FE7 263 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 KCNJ16Q9NPI9 418 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 TMEM100Q9NV29 134 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 MAB21L2Q9Y586 359 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 A0A0D9SG52 128 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 C5orf51A6NDU8 294 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 FAM25EA8MYX2 175 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 C16orf97H3BN30 126 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 LILRA1O75019 489 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 NOS1APO75052 506 aaPredicted RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 RP2O75695 350 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 AGFG2O95081 481 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 THBDP07204 575 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 CXCL2P19875 107 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 GCH1P30793 250 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 RBMXP38159 391 aaKnown RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 HTR2BP41595 481 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 UCP3P55916 312 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 HERV-K104P61576 105 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 BAMBIQ13145 260 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 ABCA11PQ4W5N1 156 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 FAM76BQ5HYJ3 339 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 ZNF660Q6AZW8 331 aaPredicted RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 THAP6Q8TBB0 222 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 KLF14Q8TD94 323 aaPredicted RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 RNASE6Q93091 150 aaKnown RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 NMES1Q9C002 83 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 HEXA-AS1Q9H8Q6 139 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 C1orf123Q9NWV4 160 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 ZNF581Q9P0T4 197 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 KCNIP3Q9Y2W7 256 aa12.91□□□□□ -0.34
TUBB4B-201ENST00000340384 SPTBN1Q01082 2364 aaKnown RBP12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 DIRAS3O95661 229 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 ACAA1P09110 424 aaPredicted RBP12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 CECR9P0C854 216 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 KITLGP21583 273 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 GLRA1P23415 457 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 PSG7Q13046 419 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 SLC9A3R2Q15599 337 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 TIMM23BQ5SRD1 257 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 C11orf87Q6NUJ2 197 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 BRICD5Q6PL45 260 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 TMUB2Q71RG4 321 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 SLC38A6Q8IZM9 456 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 OR8G5Q8NG78 346 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 DYRK2Q92630 601 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 SYT3Q9BQG1 590 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 PURGQ9UJV8 347 aaKnown RBP12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 SLC25A15Q9Y619 301 aa12.9□□□□□ -0.34
TUBB4B-201ENST00000340384 TRBV6-6A0A0A6YYG2 114 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 TEX13DA0A0J9YY54 714 aaPredicted RBP12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 CCSO14618 274 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 NAPSAO96009 420 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 KNG1P01042 644 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 FCGR2CP31995 323 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 RAB14P61106 215 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 PDCD1Q15116 288 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 MBNL2Q5VZF2 373 aaKnown RBP12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 ZNF546Q86UE3 836 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 BATF2Q8N1L9 274 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 MOB3AQ96BX8 217 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 MUCL1Q96DR8 90 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 CYYR1Q96J86 154 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 WFIKKN1Q96NZ8 548 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 C1QTNF6Q9BXI9 259 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 WDR13Q9H1Z4 485 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 CXXC4Q9H2H0 198 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 Q9N2K0 584 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 GLS2Q9UI32 602 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
TUBB4B-201ENST00000340384 HCFC1P51610 2035 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 FAM221AA4D161 298 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 DEGS1O15121 323 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 OR2F2O95006 317 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 TK1P04183 234 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 PET100P0DJ07 73 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 PI3P19957 117 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 SERPINF1P36955 418 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 ERVS71-1P61550 626 aa12.88□□□□□ -0.35
TUBB4B-201ENST00000340384 SUPT4H1P63272 117 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms