RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 LRBAP50851 2863 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 MKRN2OSH3BPM6 223 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 NXPH2O95156 264 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 OR2H2O95918 312 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 FAM87AP0C7U9 286 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 GALNT11Q8NCW6 608 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 ZNF471Q9BX82 626 aaPredicted RBP13.1□□□□□ -0.31
MBD1-203ENST00000339998 PURGQ9UJV8 347 aaKnown RBP13.1□□□□□ -0.31
MBD1-203ENST00000339998 SCGB1D2O95969 90 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 Q6P435 159 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 Q8NA96 180 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 TP53RKQ96S44 253 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
MBD1-203ENST00000339998 DECR2Q9NUI1 292 aa13.1□□□□□ -0.31
MBD1-203ENST00000339998 HSD17B6O14756 317 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 GNRHRP30968 328 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 IAH1Q2TAA2 248 aaPredicted RBP13.09□□□□□ -0.31
MBD1-203ENST00000339998 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 RAB18Q9NP72 206 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 TMEM100Q9NV29 134 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 SLC25A15Q9Y619 301 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 IQCF6A8MYZ5 107 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 HERV-K104P61576 105 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 FGL1Q08830 312 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
MBD1-203ENST00000339998 C1orf185Q5T7R7 199 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 C11orf53Q8IXP5 236 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 TPRX1Q8N7U7 411 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 MOB3AQ96BX8 217 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 PARP12Q9H0J9 701 aaKnown RBP13.09□□□□□ -0.31
MBD1-203ENST00000339998 OR1A1Q9P1Q5 309 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
MBD1-203ENST00000339998 SLC33A1O00400 549 aaPredicted RBP13.08□□□□□ -0.31
MBD1-203ENST00000339998 PHF1O43189 567 aaPredicted RBP13.08□□□□□ -0.31
MBD1-203ENST00000339998 ZNF250P15622 560 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 GLP1RP43220 463 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 MPV17LQ2QL34 196 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 PAN3Q58A45 887 aaKnown RBP13.08□□□□□ -0.31
MBD1-203ENST00000339998 FAM180AQ6UWF9 173 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 COMMD7Q86VX2 200 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 GLYATL2Q8WU03 294 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 CCL28Q9NRJ3 127 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 METRNQ9UJH8 293 aa13.08□□□□□ -0.31
MBD1-203ENST00000339998 USF3Q68DE3 2245 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 PSPNO60542 156 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 SLC34A2O95436 690 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 DIRAS3O95661 229 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 BOLLQ8N9W6 283 aaKnown RBP13.08□□□□□ -0.32
MBD1-203ENST00000339998 POC1AQ8NBT0 407 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 OR1S1Q8NH92 325 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 NAA60Q9H7X0 242 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 hCG_1807616A0A1W2PRN6 198 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 LRP5LA4QPB2 252 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
MBD1-203ENST00000339998 NMBP08949 121 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 SLC25A4P12235 298 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 TMEM187Q14656 261 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 CCDC36Q8IYA8 594 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 GAPTQ8N292 157 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 KCNRGQ8N5I3 272 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 OR8G5Q8NG78 346 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 ST8SIA2Q92186 375 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 SYT3Q9BQG1 590 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 NMES1Q9C002 83 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 PKIBQ9C010 78 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 SHPKQ9UHJ6 478 aa13.08□□□□□ -0.32
MBD1-203ENST00000339998 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 IGLV1-44P01699 117 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 ERVK11-1P61568 191 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 NAAAQ02083 359 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 NHLH1Q02575 133 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 CLLU1Q5K131 121 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 BEND4Q6ZU67 534 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 ACOT7LQ6ZUV0 252 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 NRIP2Q9BQI9 281 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 C1orf123Q9NWV4 160 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 RASL12Q9NYN1 266 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 LSM5Q9Y4Y9 91 aaKnown RBP13.07□□□□□ -0.32
MBD1-203ENST00000339998 F5H0A9 414 aaPredicted RBP13.07□□□□□ -0.32
MBD1-203ENST00000339998 ATXN7O15265 892 aaPredicted RBP13.07□□□□□ -0.32
MBD1-203ENST00000339998 NXPH3O95157 252 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 PGA5P0DJD9 388 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 RAB14P61106 215 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 SNTB1Q13884 538 aaKnown RBP13.07□□□□□ -0.32
MBD1-203ENST00000339998 PCSK4Q6UW60 755 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 DOLPP1Q86YN1 238 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
MBD1-203ENST00000339998 C2orf50Q96LR7 162 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 TREM2Q9NZC2 230 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 ABCA4P78363 2273 aa13.07□□□□□ -0.32
MBD1-203ENST00000339998 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
MBD1-203ENST00000339998 FAM90A18PA6NE21 464 aa13.06□□□□□ -0.32
MBD1-203ENST00000339998 FAM90A16PA6NEW6 464 aa13.06□□□□□ -0.32
MBD1-203ENST00000339998 FAM90A20PA6NIJ5 464 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms