RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 GSG1Q2KHT4 349 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 NSUN5P2Q63ZY6 315 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 C16orf70Q9BSU1 422 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 MBNL1Q9NR56 388 aaKnown RBP11.45□□□□□ -0.58
USP47-202ENST00000339865 PPIL1Q9Y3C6 166 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 FER1L4A9Z1Z3 1794 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 WNT5AP41221 380 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 LRRC3BQ96PB8 259 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 AKIP1Q9NQ31 210 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 DLL1O00548 723 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 CD74P04233 296 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 MGAT2Q10469 447 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 DUSP8Q13202 625 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 CA13Q8N1Q1 262 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 RASL11BQ9BPW5 248 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 TNCP24821 2201 aa11.45□□□□□ -0.58
USP47-202ENST00000339865 DNAJC25-GNG10A0A024R161 153 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 DSCR3O14972 297 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 KISS1Q15726 138 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 COX19Q49B96 90 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 ATOH7Q8N100 152 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 YIPF6Q96EC8 236 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 MS4A7Q9GZW8 240 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 CYSLTR2Q9NS75 346 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 GDE1Q9NZC3 331 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 TGIF2-C20orf24A0A0A6YYL0 155 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 TMEM272A0A1B0GTI8 110 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 HSPB2A8KAH6 182 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 GPX2P18283 190 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 OR3A4PP47883 348 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 YPEL5P62699 121 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 HSPB2Q16082 182 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 MEIG1Q5JSS6 88 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 KISS1RQ969F8 398 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 AQP10Q96PS8 301 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 CES1P1Q9UKY3 287 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 TBL2Q9Y4P3 447 aaKnown RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 SNAI1O95863 264 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 SBK3P0C264 359 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 ALKBH3Q96Q83 286 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 RECKO95980 971 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 TMEM255AQ5JRV8 349 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 FAM53AQ6NSI3 398 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 FGF13Q92913 245 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 CHRNA10Q9GZZ6 450 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 LRP12Q9Y561 859 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 RER1O15258 196 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 MDKP21741 143 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 COX7A1P24310 79 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 KLF3P57682 345 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 GNG3P63215 75 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 RFLNAQ6ZTI6 216 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 CCL17Q92583 94 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 PRKNO60260 465 aaPredicted RBP11.44□□□□□ -0.58
USP47-202ENST00000339865 ATF1P18846 271 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 CLDN15P56746 228 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 TNXAQ16473 311 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 JKAMPQ9P055 326 aa11.44□□□□□ -0.58
USP47-202ENST00000339865 C7orf71A4D174 169 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 PAFAH1B2P68402 229 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 ABHD17CQ6PCB6 329 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 PP6455Q8WZ26 134 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 LYRM4Q9HD34 91 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 ASCL3Q9NQ33 180 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 C1QTNF9BB2RNN3 333 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 ASB16Q96NS5 453 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 FREM1Q5H8C1 2179 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 CA1P00915 261 aaPredicted RBP11.43□□□□□ -0.58
USP47-202ENST00000339865 TSPO2Q5TGU0 170 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 FOXB2Q5VYV0 432 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 PAGE4O60829 102 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 B4GALNT1Q00973 533 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 KHDC3LQ587J8 217 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 PCNX1Q96RV3 2341 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 DLEU7Q6UYE1 221 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 FAM222BQ8WU58 562 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
USP47-202ENST00000339865 KLK15Q9H2R5 256 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 RABAC1Q9UI14 185 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 GFRA1P56159 465 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 UNQ9370/PRO34162Q6UXP9 181 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 BAHD1Q8TBE0 780 aaPredicted RBP11.43□□□□□ -0.58
USP47-202ENST00000339865 GABRG3Q99928 467 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 CDS2O95674 445 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 MMP9P14780 707 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 FOXO1Q12778 655 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 KLF16Q9BXK1 252 aaPredicted RBP11.43□□□□□ -0.58
USP47-202ENST00000339865 NPFFR1Q9GZQ6 430 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 WDR13Q9H1Z4 485 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms