RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 FCGR2CP31995 323 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 TNFSF10P50591 281 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 RBM11P57052 281 aaKnown RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 PIGPP57054 158 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 S100A10P60903 97 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 ARG2P78540 354 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 PDZK1IP1Q13113 114 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 MPV17LQ2QL34 196 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 RNF212Q495C1 297 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 ZNF324BQ6AW86 544 aaPredicted RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 RPL7L1Q6DKI1 246 aaKnown RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 FAM180AQ6UWF9 173 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 LINC00518Q8N0U6 118 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 OR5D18Q8NGL1 313 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 ROBO4Q8WZ75 1007 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 IL22RA2Q969J5 263 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 MSI2Q96DH6 328 aaKnown RBP9.28□□□□□ -0.92
RTN3-201ENST00000338850 TAAR6Q96RI8 345 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 UCN2Q96RP3 112 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 FOXB1Q99853 325 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 TLNRD1Q9H1K6 362 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 C11orf1Q9H5F2 150 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 GPR173Q9NS66 373 aa9.28□□□□□ -0.92
RTN3-201ENST00000338850 NCKAP5O14513 1909 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 SVILO95425 2214 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 IGKV1-27A0A075B6S5 117 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 BTBD17A6NE02 478 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 LRRC3CA6NJW4 275 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 TNFSF11O14788 317 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 ST8SIA3O43173 380 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 SS18L1O75177 396 aaPredicted RBP9.27□□□□□ -0.93
RTN3-201ENST00000338850 MED6O75586 246 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 FARS2O95363 451 aaKnown RBP9.27□□□□□ -0.93
RTN3-201ENST00000338850 PLATP00750 562 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 SFTPBP07988 381 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 CTXN2P0C2S0 81 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 PI3P19957 117 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 FUT3P21217 361 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 GABRR1P24046 479 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 LPAR6P43657 344 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 TDGF1P3P51864 188 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 TMEM33P57088 247 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 S100A12P80511 92 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 FOXO1Q12778 655 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 MALLQ13021 153 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 ABCA11PQ4W5N1 156 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 AAED1Q7RTV5 226 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 OR10AD1Q8NGE0 317 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 OR4D5Q8NGN0 318 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 MRPL24Q96A35 216 aaKnown RBP9.27□□□□□ -0.93
RTN3-201ENST00000338850 TMEM56Q96MV1 263 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 SULT4A1Q9BR01 284 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 WNT5BQ9H1J7 359 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 RIMS4Q9H426 269 aaPredicted RBP9.27□□□□□ -0.93
RTN3-201ENST00000338850 TREM1Q9NP99 234 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 BIN3Q9NQY0 253 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 SLC2A9Q9NRM0 540 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 TMEM56-RWDD3S4R434 201 aa9.27□□□□□ -0.93
RTN3-201ENST00000338850 CELSR2Q9HCU4 2923 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 DIDO1Q9BTC0 2240 aaKnown RBP9.26□□□□□ -0.93
RTN3-201ENST00000338850 F10P00742 488 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 KNG1P01042 644 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 OPN1LWP04000 364 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 LCATP04180 440 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 DBHP09172 617 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 SLC25A6P12236 298 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
RTN3-201ENST00000338850 HTR5AP47898 357 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 KCNJ3P48549 501 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 RAB13P51153 203 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 CARD18P57730 90 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 PSG4Q00888 419 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 HGFACQ04756 655 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 PEA15Q15121 130 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 OR8G1Q15617 311 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 AVPI1Q5T686 147 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 ZNF774Q6NX45 483 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 Q6ZRG5 221 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.26□□□□□ -0.93
RTN3-201ENST00000338850 BHLHE23Q8NDY6 225 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 NPRL2Q8WTW4 380 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 RELTQ969Z4 430 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 GNRHR2Q96P88 292 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 SCRT1Q9BWW7 348 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 PLK3Q9H4B4 646 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 ELL3Q9HB65 397 aaPredicted RBP9.26□□□□□ -0.93
RTN3-201ENST00000338850 CRLF2Q9HC73 371 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 GPR35Q9HC97 309 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 PARPBPQ9NWS1 579 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 MLXQ9UH92 298 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 ABCA12Q86UK0 2595 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 CREBBPQ92793 2442 aa9.26□□□□□ -0.93
RTN3-201ENST00000338850 IGKV1-12A0A0C4DH73 117 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 KIR2DS1A0A191URI9 304 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 LRP5LA4QPB2 252 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms