RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RSPO3Q9BXY4 272 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-201ENST00000337299 LOC101059948A0A1B0GTJ6 334 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 MPPED1O15442 326 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 HSPB1P04792 205 aaKnown RBP11.63□□□□□ -0.55
COL2A1-201ENST00000337299 FCGR3AP08637 254 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 CCL20P78556 96 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 ZNF816Q0VGE8 651 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-201ENST00000337299 CATR1Q13166 79 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 TDHQ8IZJ6 230 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 TUBA4BQ9H853 241 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 ERRFI1Q9UJM3 462 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-201ENST00000337299 GBF1Q92538 1859 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 MYO16Q9Y6X6 1858 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 F8VVB4 439 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 F8VWA3 439 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 ABHD16AO95870 558 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 IL2RAP01589 272 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 PEBP1P30086 187 aaKnown RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 HYAL1Q12794 435 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 RTP5Q14D33 572 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 SHBQ15464 509 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 TIGITQ495A1 244 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 ATOH7Q8N100 152 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 HIST3H2BBQ8N257 126 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 PLPPR2Q96GM1 343 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 TPPP3Q9BW30 176 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 DOCK6Q96HP0 2047 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 LOC390937A0A1W2PQ73 354 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 DBX1A6NMT0 343 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 CD5P06127 495 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 PATE4P0C8F1 98 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 CHRNB4P30926 498 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 ARL3P36405 182 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 IER3P46695 156 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 RAB7AP51149 207 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 STARD6P59095 220 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 IL24Q13007 206 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 RNASEKQ6P5S7 137 aaKnown RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 SLC25A43Q8WUT9 341 aaPredicted RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 PP6455Q8WZ26 134 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 ELSPBP1Q96BH3 223 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 GREB1Q4ZG55 1949 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 TNS1Q9HBL0 1735 aaKnown RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 GYPAP02724 150 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 GFERP55789 205 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 GCNT2Q8N0V5 402 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 COX14Q96I36 57 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 DIDO1Q9BTC0 2240 aaKnown RBP11.62□□□□□ -0.55
COL2A1-201ENST00000337299 LTBP1Q14766 1721 aa11.62□□□□□ -0.55
COL2A1-201ENST00000337299 EGR1P18146 543 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
COL2A1-201ENST00000337299 UNC119Q13432 240 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 GTF2H5Q6ZYL4 71 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 H2BFWTQ7Z2G1 175 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 MRGPRGQ86SM5 289 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 SFTPA2Q8IWL1 248 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 GAPTQ8N292 157 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 OR5D13Q8NGL4 314 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 C11orf94C9JXX5 98 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 GREM1O60565 184 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 CISD3P0C7P0 127 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 THBS3P49746 956 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 TNFSF10P50591 281 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 IZUMO4Q1ZYL8 232 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 LEMD1Q68G75 181 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 PLA2G3Q9NZ20 509 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 CYR61O00622 381 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
COL2A1-201ENST00000337299 ACTL6BO94805 426 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 PPYP01298 95 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 ZNF735P0CB33 412 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 WNT5AP41221 380 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 PLGLB1Q02325 96 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 ELOBQ15370 118 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 PIGYQ3MUY2 71 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 HIKESHIQ53FT3 197 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 TMPRSS7Q7RTY8 843 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 SMDT1Q9H4I9 107 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
COL2A1-201ENST00000337299 CCL28Q9NRJ3 127 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 SLC17A4Q9Y2C5 497 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 RFNGQ9Y644 331 aa11.61□□□□□ -0.55
COL2A1-201ENST00000337299 EREGO14944 169 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 OR7C2O60412 319 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 HPRT1P00492 218 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 SRP19P09132 144 aaKnown RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 PNLIPP16233 465 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 THBS4P35443 961 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms