RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MAB21L2Q9Y586 359 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 A6NLC8 198 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 RFPL4AA6NLU0 287 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 RFPL4AL1F8VTS6 287 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 SMPD2O60906 423 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 SFT2D2O95562 160 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 DUS4LO95620 317 aaKnown RBP10.74□□□□□ -0.69
LIMK1-201ENST00000336180 OR5AC1P0C628 307 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 CEACAM1P13688 526 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 RPA2P15927 270 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 FUT3P21217 361 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 FPR2P25090 351 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 CD82P27701 267 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 ASCL1P50553 236 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF83P51522 516 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 RAB32Q13637 225 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 GABRA6Q16445 453 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 C9orf152Q5JTZ5 239 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 DPPA2Q7Z7J5 298 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 MKXQ8IYA7 352 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 DKK4Q9UBT3 224 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 MIOXQ9UGB7 285 aa10.74□□□□□ -0.69
LIMK1-201ENST00000336180 RALYQ9UKM9 306 aaKnown RBP10.74□□□□□ -0.69
LIMK1-201ENST00000336180 HSD17B6O14756 317 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 IFNA7P01567 189 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 PSG7Q13046 419 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 MPPED2Q15777 294 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 ACSF3Q4G176 576 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 ABCA11PQ4W5N1 156 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 C11orf87Q6NUJ2 197 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 LHFPL1Q86WI0 220 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 SNIP1Q8TAD8 396 aaKnown RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 LSM5Q9Y4Y9 91 aaKnown RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 IL2RAP01589 272 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF14P17017 642 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 HOXC12P31275 282 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 PRR30Q53SZ7 412 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 Q8NFD4 153 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 OR5P3Q8WZ94 311 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 LRBAP50851 2863 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 RNF222A6NCQ9 220 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 F5H0A9 414 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF728P0DKX0 622 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 RPS2P15880 293 aaKnown RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 LYZL2Q7Z4W2 148 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 CISD2Q8N5K1 135 aaKnown RBP10.73□□□□□ -0.69
LIMK1-201ENST00000336180 THAP6Q8TBB0 222 aa10.73□□□□□ -0.69
LIMK1-201ENST00000336180 RAB13P51153 203 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF660Q6AZW8 331 aaPredicted RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 C22orf34Q6ZV56 151 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 LRP11Q86VZ4 500 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 ADAT1Q9BUB4 502 aaKnown RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 ANAPC10Q9UM13 185 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 hCG_1807616A0A1W2PRN6 198 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 SS18L1O75177 396 aaPredicted RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 BMP5P22003 454 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 TGFBR3Q03167 851 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 IZUMO4Q1ZYL8 232 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 IAH1Q2TAA2 248 aaPredicted RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 SUMF2Q8NBJ7 301 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 NANOS1Q8WY41 292 aaKnown RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 SARAFQ96BY9 339 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF286AQ9HBT8 521 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 NECAP2Q9NVZ3 263 aa10.72□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF107Q9UII5 783 aaPredicted RBP10.72□□□□□ -0.69
LIMK1-201ENST00000336180 IGKV1D-13A0A0B4J2D9 117 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 IGHV3-13P01766 116 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 IGHV3-7P01780 117 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 IGHG3P01860 377 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 CECR9P0C854 216 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 IGKV1-13P0DP09 117 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 UCP2P55851 309 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 SSX9Q7RTT3 188 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 RBMXL3Q8N7X1 1067 aaKnown RBP10.71□□□□□ -0.69
LIMK1-201ENST00000336180 WDR31Q8NA23 367 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 PXT1Q8NFP0 134 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 RTN4IP1Q8WWV3 396 aaPredicted RBP10.71□□□□□ -0.69
LIMK1-201ENST00000336180 ABHD17AQ96GS6 310 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 LINC00052Q96N35 136 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 SCNM1Q9BWG6 230 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 PHF1O43189 567 aaPredicted RBP10.71□□□□□ -0.69
LIMK1-201ENST00000336180 CRHP06850 196 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 ZNF154Q13106 437 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 HERPUD1Q15011 391 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 LTC4SQ16873 150 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 ELP2Q6IA86 826 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 SCCPDHQ8NBX0 429 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 KLF14Q8TD94 323 aaPredicted RBP10.71□□□□□ -0.69
LIMK1-201ENST00000336180 NUDT16L1Q9BRJ7 211 aaKnown RBP10.71□□□□□ -0.69
LIMK1-201ENST00000336180 RNF126Q9BV68 326 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 FAM212BQ9NTI7 297 aaPredicted RBP10.71□□□□□ -0.69
LIMK1-201ENST00000336180 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
LIMK1-201ENST00000336180 MED19A0JLT2 244 aaPredicted RBP10.71□□□□□ -0.7
LIMK1-201ENST00000336180 ATXN7O15265 892 aaPredicted RBP10.71□□□□□ -0.7
LIMK1-201ENST00000336180 TBPP20226 339 aa10.71□□□□□ -0.7
LIMK1-201ENST00000336180 PSMB6P28072 239 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms