RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 POM121L2Q96KW2 1035 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 QTRT1Q9BXR0 403 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 TAC3Q9UHF0 121 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 SDK1Q7Z5N4 2213 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CGB1A6NKQ9 187 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 DSCR3O14972 297 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 UMODP07911 640 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CCL2P13500 99 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 HMGA2P52926 109 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 TROAPQ12815 778 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 RTP5Q14D33 572 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF683Q8IZ20 524 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 H1FOOQ8IZA3 346 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 METTL26Q96S19 204 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CHAC1Q9BUX1 264 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 HSD3B7Q9H2F3 369 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PRDM13Q9H4Q3 707 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CXorf36Q9H7Y0 433 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GNG12Q9UBI6 72 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FZR1Q9UM11 496 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 C10orf71Q711Q0 1435 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 H3BTX0 84 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GPR183P32249 361 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 TM4SF4P48230 202 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PSG3Q16557 428 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC5A12Q1EHB4 618 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PLPPR4Q7Z2D5 763 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 LILRA2Q8N149 483 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ARRDC1Q8N5I2 433 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PTPMT1Q8WUK0 201 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPP1R1CQ8WVI7 109 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FNDC4Q9H6D8 234 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 AKIP1Q9NQ31 210 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CFAP20Q9Y6A4 193 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 NWD2Q9ULI1 1742 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF716A6NP11 495 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC17A2O00624 439 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF626Q68DY1 528 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 LRFN4Q6PJG9 635 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FCRLAQ7L513 359 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 LINC00470Q9BZP3 86 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 IKZF5Q9H5V7 419 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 IGSF5Q9NSI5 407 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 THAP10Q9P2Z0 257 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 KCNE5Q9UJ90 142 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF443Q9Y2A4 671 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PATJQ8NI35 1801 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FAM183AA6NL82 134 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 KLRC4-KLRK1H3BQV0 150 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 KLRC4O43908 158 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 JCHAINP01591 159 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 HRH2P25021 359 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 C2orf68Q2NKX9 166 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR2Z1Q8NG97 314 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GPR32P1Q8NGA4 272 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR5P3Q8WZ94 311 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GGTLC1Q9BX51 225 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 EGLN1Q9GZT9 426 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 H3BML4 177 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 THOC6Q86W42 341 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR1L6Q8NGR2 347 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR1B1Q8NGR6 318 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 NOX4Q9NPH5 578 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC5A6Q9Y289 635 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF737O75373 536 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 CXCL8P10145 99 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 YPEL3P61236 119 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM211Q6ICI0 200 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 DLEU7Q6UYE1 221 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 GDF7Q7Z4P5 450 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 VSTM2LQ96N03 204 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 TNFRSF13CQ96RJ3 184 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 ABHD1Q96SE0 405 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 SPHK2Q9NRA0 654 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 COL3A1P02461 1466 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPIHO43447 177 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 GPX1P07203 203 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 SOWAHAQ2M3V2 549 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 DUSP28Q4G0W2 176 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 PHF13Q86YI8 300 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR1A2Q9Y585 309 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 MON2Q7Z3U7 1717 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 A0A0U1RQV1 116 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 H3BQ85 93 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF324O75467 553 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 IL1RNP18510 177 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 CDKN2AP42771 156 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 MRPL30Q8TCC3 161 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 NANOGQ9H9S0 305 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 DSCAML1Q8TD84 2053 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 BRWD1Q9NSI6 2320 aa5.4□□□□□ -1.54
CDC42BPA-201ENST00000334218 C3orf85A0A1B0GTC6 90 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 RER1O15258 196 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 NDUFC1O43677 76 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 IGHG4P01861 327 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 SNRPGP62308 76 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 GOLT1AQ6ZVE7 132 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms