RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 ATP6V0CP27449 155 aa19.36■□□□□ 0.69
HOXD1-201ENST00000331462 NOVA1P51513 510 aaKnown RBP19.36■□□□□ 0.69
HOXD1-201ENST00000331462 CLINT1Q14677 625 aa19.36■□□□□ 0.69
HOXD1-201ENST00000331462 IL22RA2Q969J5 263 aa19.36■□□□□ 0.69
HOXD1-201ENST00000331462 ZNF845Q96IR2 970 aaPredicted RBP19.36■□□□□ 0.69
HOXD1-201ENST00000331462 HIPK2Q9H2X6 1198 aa19.36■□□□□ 0.69
HOXD1-201ENST00000331462 FBXO7Q9Y3I1 522 aa19.36■□□□□ 0.69
HOXD1-201ENST00000331462 KIR2DS1A0A191URI9 304 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 CTXN2P0C2S0 81 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 TDGF1P13385 188 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 RAB5AP20339 215 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 KIR2DS4P43632 304 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 POLR2GP62487 172 aaKnown RBP eCLIP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 BAXQ07812 192 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 PRDX4Q13162 271 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 KIR2DS1Q14954 304 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 EIF2S3LQ2VIR3 472 aaKnown RBP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 SP5Q6BEB4 398 aaPredicted RBP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 ZNF818PQ6ZRF7 136 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 TMEM252Q8N6L7 170 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 ZNF565Q8N9K5 539 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 LILRB1Q8NHL6 650 aaPredicted RBP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 GTF3AQ92664 365 aaKnown RBP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 GUCD1Q96NT3 240 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 TCFL5Q9UL49 500 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 A0A1W2PPH5 198 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 SLC22A20A6NK97 555 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 A6NLC8 198 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 SS18L1O75177 396 aaPredicted RBP19.35■□□□□ 0.69
HOXD1-201ENST00000331462 GDF1P27539 372 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 SULT1A1P50225 295 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 HERPUD1Q15011 391 aa19.35■□□□□ 0.69
HOXD1-201ENST00000331462 ZNF724A8MTY0 619 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 ZNF732B4DXR9 585 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 SERPINA7P05543 415 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 VDAC1P21796 283 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 OTX2P32243 289 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 ID3Q02535 119 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 CEACAM21Q3KPI0 293 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 GAPTQ8N292 157 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 OR2G3Q8NGZ4 309 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 TMEM171Q8WVE6 324 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 SLAMF9Q96A28 289 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 SIGLEC12Q96PQ1 595 aa19.34■□□□□ 0.69
HOXD1-201ENST00000331462 METTL1Q9UBP6 276 aaKnown RBP19.34■□□□□ 0.69
HOXD1-201ENST00000331462 NOSIPQ9Y314 301 aaKnown RBP19.34■□□□□ 0.69
HOXD1-201ENST00000331462 PINLYPA6NC86 204 aa19.33■□□□□ 0.69
HOXD1-201ENST00000331462 ADAM20O43506 726 aa19.33■□□□□ 0.69
HOXD1-201ENST00000331462 CYB561P49447 251 aa19.33■□□□□ 0.69
HOXD1-201ENST00000331462 SPSB3Q6PJ21 355 aa19.33■□□□□ 0.69
HOXD1-201ENST00000331462 ZDHHC23Q8IYP9 409 aa19.33■□□□□ 0.69
HOXD1-201ENST00000331462 TNRC6AQ8NDV7 1962 aaKnown RBP19.33■□□□□ 0.69
HOXD1-201ENST00000331462 PROB1E7EW31 1015 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 HSPA12AO43301 675 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 MRPL33O75394 65 aaKnown RBP19.33■□□□□ 0.68
HOXD1-201ENST00000331462 CER1O95813 267 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 SCTP09683 121 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 RPS18P62269 152 aaKnown RBP19.33■□□□□ 0.68
HOXD1-201ENST00000331462 ARF1P84077 181 aaKnown RBP19.33■□□□□ 0.68
HOXD1-201ENST00000331462 ODF3L1Q8IXM7 274 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 OR5D13Q8NGL4 314 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 PLPPR1Q8TBJ4 325 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 ISOC2Q96AB3 205 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 KIAA1456Q9P272 454 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 ATP23Q9Y6H3 246 aa19.33■□□□□ 0.68
HOXD1-201ENST00000331462 WDR87Q6ZQQ6 2873 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 IGKV1D-13A0A0B4J2D9 117 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 H0Y980 276 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 SSSCA1O60232 199 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 S100A6P06703 90 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 IGKV1-13P0DP09 117 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 CEACAM1P13688 526 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 HAAOP46952 286 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 ASCL1P50553 236 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 HIKESHIQ53FT3 197 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 SPIN3Q5JUX0 258 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 LINC00596Q86U02 117 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 SUMF1Q8NBK3 374 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 GNPNAT1Q96EK6 184 aaPredicted RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 YPEL4Q96NS1 127 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 RIMS4Q9H426 269 aaPredicted RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 UNKLQ9H9P5 680 aaKnown RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 GLRX2Q9NS18 164 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 BOKQ9UMX3 212 aaPredicted RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 TRBV6-6A0A0A6YYG2 114 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 IGHV2-5P01817 119 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 VAMP2P63027 116 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 CXorf66Q5JRM2 361 aaPredicted RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 SOHLH1Q5JUK2 328 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 MKXQ8IYA7 352 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 UBALD2Q8IYN6 164 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 SUMF2Q8NBJ7 301 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 CD300LFQ8TDQ1 290 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 APOBEC3DQ96AK3 386 aaPredicted RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 C20orf24Q9BUV8 137 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 SEBOXQ9HB31 216 aaPredicted RBP19.32■□□□□ 0.68
HOXD1-201ENST00000331462 CRIM1Q9NZV1 1036 aa19.32■□□□□ 0.68
HOXD1-201ENST00000331462 IGKV1-6A0A0C4DH72 117 aa19.31■□□□□ 0.68
HOXD1-201ENST00000331462 RBFOX3A6NFN3 312 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms