RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TEX261Q6UWH6 196 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 WDR82Q6UXN9 313 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 OR8H1Q8NGG4 311 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 COQ8AQ8NI60 647 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 PLPPR1Q8TBJ4 325 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 TMEM165Q9HC07 324 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 RAB18Q9NP72 206 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 TUBD1Q9UJT1 453 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 U3KQ87 197 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 ARPC5O15511 151 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 IFNA2P01563 188 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 RBMXP38159 391 aaKnown RBP14.33□□□□□ -0.12
DDX41-201ENST00000330503 GLP1RP43220 463 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 PAN3Q58A45 887 aaKnown RBP14.33□□□□□ -0.12
DDX41-201ENST00000330503 C1QTNF12Q5T7M4 302 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 ZNF767PQ75MW2 155 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 TMEM171Q8WVE6 324 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 PIK3IP1Q96FE7 263 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 UFSP2Q9NUQ7 469 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 SPEF1Q9Y4P9 236 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 CADP27708 2225 aa14.33□□□□□ -0.12
DDX41-201ENST00000330503 TLN1Q9Y490 2541 aaKnown RBP14.32□□□□□ -0.12
DDX41-201ENST00000330503 C13orf42A0A1B0GVH6 325 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 C5orf51A6NDU8 294 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 SH2D1BO14796 132 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 SNAPC5O75971 98 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 RCC1P18754 421 aaPredicted RBP14.32□□□□□ -0.12
DDX41-201ENST00000330503 PIGPP57054 158 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 GSG1LQ6UXU4 331 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 TMUB2Q71RG4 321 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 ZNF680Q8NEM1 530 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 PPP1R1CQ8WVI7 109 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 RSRP1Q9BUV0 290 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 KIR2DS1A0A191URI9 304 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 MPTX1A8MV57 137 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 ATP6V1G2-DDX39BF2Z307 99 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 C16orf97H3BN30 126 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 BET1O15155 118 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 PPYP01298 95 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 SLC25A4P12235 298 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 CD40P25942 277 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 KIR2DS4P43632 304 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 CEBPDP49716 269 aaPredicted RBP14.32□□□□□ -0.12
DDX41-201ENST00000330503 FGL1Q08830 312 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 KIR2DS1Q14954 304 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 SPIN3Q5JUX0 258 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 SGPP2Q8IWX5 399 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 GAPTQ8N292 157 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 OR2Z1Q8NG97 314 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 TREM2Q9NZC2 230 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 ITGB1BP2Q9UKP3 347 aa14.32□□□□□ -0.12
DDX41-201ENST00000330503 TEX13DA0A0J9YY54 714 aaPredicted RBP14.31□□□□□ -0.12
DDX41-201ENST00000330503 ZSCAN5BA6NJL1 495 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 A6NLC8 198 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 SHEQ5VZ18 495 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 PCSK4Q6UW60 755 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 ZNF497Q6ZNH5 498 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 SYT3Q9BQG1 590 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 RASL12Q9NYN1 266 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 RDH8Q9NYR8 311 aa14.31□□□□□ -0.12
DDX41-201ENST00000330503 TUSC2O75896 110 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 HAND1O96004 215 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 CFDP00746 253 aaPredicted RBP14.3□□□□□ -0.12
DDX41-201ENST00000330503 MDH2P40926 338 aaKnown RBP14.3□□□□□ -0.12
DDX41-201ENST00000330503 CD200P41217 278 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 KCNJ3P48549 501 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 HERV-K104P61576 105 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 RBPJQ06330 500 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 LRRC37A5PQ49AS3 106 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 PHLDA2Q53GA4 152 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 SPRNQ5BIV9 151 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 C11orf87Q6NUJ2 197 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 VHLLQ6RSH7 139 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 ACP7Q6ZNF0 438 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 SLC38A6Q8IZM9 456 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 OR5T2Q8NGG2 359 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 OR11L1Q8NGX0 322 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 OR10C1Q96KK4 312 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 DMRTA2Q96SC8 542 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 NMES1Q9C002 83 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 NAA60Q9H7X0 242 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 IGLV3-9A0A075B6K5 115 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 TRAV39A0A0B4J263 110 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 PTBP3O95758 552 aaKnown RBP14.3□□□□□ -0.12
DDX41-201ENST00000330503 TK1P04183 234 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 THBDP07204 575 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 RPA2P15927 270 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 LMO1P25800 156 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 S100A11P31949 105 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 ABCA11PQ4W5N1 156 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 ZNF546Q86UE3 836 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 RTN4IP1Q8WWV3 396 aaPredicted RBP14.3□□□□□ -0.12
DDX41-201ENST00000330503 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 C1orf123Q9NWV4 160 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 COMMD9Q9P000 198 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 OR14J1Q9UGF5 321 aa14.3□□□□□ -0.12
DDX41-201ENST00000330503 M0R233 179 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 PSPNO60542 156 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 HOXB5P09067 269 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms