RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SFTPA1Q8IWL2 248 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 CISD2Q8N5K1 135 aaKnown RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 Q8N976 141 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 OR2T10Q8NGZ9 312 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 HOXB13Q92826 284 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 STARD4Q96DR4 205 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 PNO1Q9NRX1 252 aaKnown RBP10.31□□□□□ -0.76
SHMT2-201ENST00000328923 SLC35D1Q9NTN3 355 aa10.31□□□□□ -0.76
SHMT2-201ENST00000328923 IGHV1-69-2A0A0G2JMI3 117 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 OR2T8A6NH00 312 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 MSTNO14793 375 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 FSTP19883 344 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 CMPK1P30085 196 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 RBMXP38159 391 aaKnown RBP10.3□□□□□ -0.76
SHMT2-201ENST00000328923 GFRA1P56159 465 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 KRTDAPP60985 99 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 PAX2Q02962 417 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 OR13G1Q8NGZ3 307 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 SLAMF6Q96DU3 332 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 WDR76Q9H967 626 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 GPR84Q9NQS5 396 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 C1orf123Q9NWV4 160 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 KLHL13Q9P2N7 655 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 LRIT1Q9P2V4 623 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 FBXL7Q9UJT9 491 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 TP53TG3Q9ULZ0 132 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 SLC22A13Q9Y226 551 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 TRAPPC1Q9Y5R8 145 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 EDDM13A0A1B0GTR0 161 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 GJE1A6NN92 205 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 CEACAM18A8MTB9 384 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 SH2D1BO14796 132 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 MLF1P58340 268 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 RAC3P60763 192 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 FFAR4Q5NUL3 377 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 GPR157Q5UAW9 335 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 WBP2NLQ6ICG8 309 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 OR4D6Q8NGJ1 314 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 PRDM6Q9NQX0 595 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 MRPL27Q9P0M9 148 aaKnown RBP10.3□□□□□ -0.76
SHMT2-201ENST00000328923 GOLGA4Q13439 2230 aaKnown RBP10.3□□□□□ -0.76
SHMT2-201ENST00000328923 GON4LQ3T8J9 2241 aa10.3□□□□□ -0.76
SHMT2-201ENST00000328923 SNRNP200O75643 2136 aaKnown RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PPIAL4EA0A075B759 164 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PPIAL4CA0A0B4J2A2 164 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 EPOPA6NHQ4 379 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 FIGNL2A6NMB9 653 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 DIRC3C9JPN6 131 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PPIAL4DF5H284 164 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 SDCBPO00560 298 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 RAB29O14966 203 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 NKX2-2O95096 273 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PPIAL4FP0DN26 164 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 GLB1P16278 677 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 CDKN2AP42771 156 aaKnown RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 RPL15P61313 204 aaKnown RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 RPS15AP62244 130 aaKnown RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 ELAVL3Q14576 367 aaKnown RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 OTPQ5XKR4 325 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 OR5AU1Q8NGC0 362 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 ASB10Q8WXI3 467 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PARLQ9H300 379 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 ZNF586Q9NXT0 402 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 OBP2AQ9NY56 170 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PRSS50Q9UI38 385 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 ARID1BQ8NFD5 2236 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 G3V4G9 280 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 SLC25A17O43808 307 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 TYMSP04818 313 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 GNRHRP30968 328 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 GABRA3P34903 492 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 EMDP50402 254 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 PAFAH1B2P68402 229 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 RUNX1Q01196 453 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 EMC4Q5J8M3 183 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 CDCP2Q5VXM1 449 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 SHISA2Q6UWI4 295 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 VN1R4Q7Z5H5 301 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 OR6N2Q8NGY6 317 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 RHBDD1Q8TEB9 315 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 IGFLR1Q9H665 355 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 ZNF665Q9H7R5 613 aa10.29□□□□□ -0.76
SHMT2-201ENST00000328923 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
SHMT2-201ENST00000328923 RBFOX2O43251 390 aaKnown RBP eCLIP10.28□□□□□ -0.765e-15■■■■■ 33.3
SHMT2-201ENST00000328923 SERF1AO75920 110 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 TIAF1O95411 115 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 SMIM10L1P0DMW3 83 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 BCL2P10415 239 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 PEBP1P30086 187 aaKnown RBP10.28□□□□□ -0.76
SHMT2-201ENST00000328923 MPLP40238 635 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 CSNK1A1P48729 337 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 SELENOVP59797 346 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 PDGFRLQ15198 375 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 FIGLAQ6QHK4 219 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 DTWD2Q8NBA8 298 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 PSMF1Q92530 271 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 SMIM10Q96HG1 83 aa10.28□□□□□ -0.76
SHMT2-201ENST00000328923 VN1R1Q9GZP7 353 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms