RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TAAR9Q96RI9 348 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 CCL28Q9NRJ3 127 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 B4GALT7Q9UBV7 327 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 LOC400499M0QZD8 3231 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 TRAV39A0A0B4J263 110 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 PQLC2LA1A4F0 135 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 CST7O76096 145 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 KCNJ3P48549 501 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 PEAR1Q5VY43 1037 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-201ENST00000320755 USB1Q9BQ65 265 aaKnown RBP14.94□□□□□ -0.02
COL9A1-201ENST00000320755 IER2Q9BTL4 223 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 TTTY12Q9BZ98 90 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 LUZP4Q9P127 313 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 TMED3Q9Y3Q3 217 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 ADAM20O43506 726 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 ACP1P24666 158 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 NKX2-1P43699 371 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-201ENST00000320755 P2RY1P47900 373 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 TGIF1Q15583 401 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 GUK1Q16774 197 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 MKXQ8IYA7 352 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 LRTM2Q8N967 370 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 UBALD1Q8TB05 177 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 APH1AQ96BI3 265 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 C14orf79Q96F83 325 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 GUCD1Q96NT3 240 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 CLCC1Q96S66 551 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 SPACA1Q9HBV2 294 aa14.94□□□□□ -0.02
COL9A1-201ENST00000320755 ESPL1Q14674 2120 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 MEX3AA1L020 520 aaKnown RBP14.93□□□□□ -0.02
COL9A1-201ENST00000320755 DANCRP0C864 163 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 GPR157Q5UAW9 335 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 COLCA1Q6ZS62 124 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 MCEMP1Q8IX19 187 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 PRR18Q8N4B5 295 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 IL1F10Q8WWZ1 152 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 TMEM222Q9H0R3 208 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 FAM86C1Q9NVL1 165 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 UCP3P55916 312 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 EWSR1Q01844 656 aaKnown RBP eCLIP14.93□□□□□ -0.02
COL9A1-201ENST00000320755 HERPUD1Q15011 391 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 HIKESHIQ53FT3 197 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 NUFIP2Q7Z417 695 aaKnown RBP14.93□□□□□ -0.02
COL9A1-201ENST00000320755 CD300LFQ8TDQ1 290 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 ISOC2Q96AB3 205 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 Q9N2K0 584 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 C19orf12Q9NSK7 152 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 PRR14LQ5THK1 2151 aa14.93□□□□□ -0.02
COL9A1-201ENST00000320755 H2AFB1P0C5Y9 115 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 EPHA1P21709 976 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 SNCAP37840 140 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 RAB13P51153 203 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 IL13RA2Q14627 380 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 CEACAM21Q3KPI0 293 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 ZNF528Q3MIS6 628 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 OR2C3Q8N628 320 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 TMEM251Q8N6I4 163 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 APOBEC3DQ96AK3 386 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-201ENST00000320755 ABHD14AQ9BUJ0 271 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 MAP1BP46821 2468 aaKnown RBP14.92□□□□□ -0.02
COL9A1-201ENST00000320755 TRDCB7Z8K6 153 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 GPR37O15354 613 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 SEC11BP0C7V7 166 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 OR13C7P0DN81 318 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 CEBPGP53567 150 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 AVPI1Q5T686 147 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 C20orf204Q6ZNR8 217 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 LINC00518Q8N0U6 118 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 TMEM45BQ96B21 275 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 TECTBQ96PL2 329 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 CACFD1Q9UGQ2 172 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 IL17BQ9UHF5 180 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 POMT1Q9Y6A1 747 aa14.92□□□□□ -0.02
COL9A1-201ENST00000320755 DSPP15924 2871 aaKnown RBP14.92□□□□□ -0.02
COL9A1-201ENST00000320755 A0A1W2PNU3 283 aaPredicted RBP14.91□□□□□ -0.02
COL9A1-201ENST00000320755 CD300LBA8K4G0 201 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 CDRT15L2A8MXV6 281 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 PPP1CCP36873 323 aaKnown RBP14.91□□□□□ -0.02
COL9A1-201ENST00000320755 MPLP40238 635 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 FGF12P61328 243 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 PLP2Q04941 152 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 ZFP62Q8NB50 900 aaPredicted RBP14.91□□□□□ -0.02
COL9A1-201ENST00000320755 OR4D5Q8NGN0 318 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 IP6K3Q96PC2 410 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 PRSS50Q9UI38 385 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 SVILO95425 2214 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 IGSF23A1L1A6 192 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 SLC22A20A6NK97 555 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 VAMP2P63027 116 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 IZUMO4Q1ZYL8 232 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 OR2T2Q6IF00 324 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 OR51H1Q8NH63 302 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 BOD1Q96IK1 185 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 GINS3Q9BRX5 216 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 DEFB127Q9H1M4 99 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 MRPS18CQ9Y3D5 142 aaKnown RBP14.91□□□□□ -0.02
COL9A1-201ENST00000320755 IGKV3D-15A0A087WSY6 115 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 A0A1W2PR80 420 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 FAM157AC9JC47 383 aa14.91□□□□□ -0.02
COL9A1-201ENST00000320755 DCAF10Q5QP82 559 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms