RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SOHLH1Q5JUK2 328 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 ATP1A1-AS1Q5TC04 95 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF610Q8N9Z0 462 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 HSD17B11Q8NBQ5 300 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 ABHD14AQ9BUJ0 271 aa13.46□□□□□ -0.26
SHROOM1-201ENST00000319854 IGKV1D-8A0A087WSZ0 117 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 TRGC2P03986 189 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 HPNP05981 417 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 CHRM2P08172 466 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 FKBP2P26885 142 aaKnown RBP13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 RAB1AP62820 205 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 KCNMB1Q16558 191 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 C10orf128Q5T292 105 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 FAAP24Q9BTP7 215 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 LOC102725191A0A1B0GVB3 256 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 XRCC2O43543 280 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 FABP4P15090 132 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 CPNE4Q96A23 557 aaPredicted RBP13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 LUZP4Q9P127 313 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 IL17BQ9UHF5 180 aa13.45□□□□□ -0.26
SHROOM1-201ENST00000319854 GJE1A6NN92 205 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 FOXG1P55316 489 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 GGNBP1Q5YKI7 109 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 COMMD1Q8N668 190 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 OR2V1Q8NHB1 315 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 HPSE2Q8WWQ2 592 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 PSMF1Q92530 271 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 PIGCQ92535 297 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 RAB39BQ96DA2 213 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 FOXB1Q99853 325 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 STRADBQ9C0K7 418 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 MEMO1Q9Y316 297 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 SEC14L6B5MCN3 397 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 H0YL77 283 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 PSG4Q00888 419 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 CHRFAM7AQ494W8 412 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 CYB5R2Q6BCY4 276 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 CRIP3Q6Q6R5 217 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 MCTS1Q9ULC4 181 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 C3orf80F5H4A9 247 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 H3BQ15 152 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 DIRAS3O95661 229 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 MBPP02686 304 aaPredicted RBP13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 SEC11BP0C7V7 166 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 CASP6P55212 293 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 NHLH2Q02577 135 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 SSX2Q16385 188 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 SUMF2Q8NBJ7 301 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 OR1F12Q8NHA8 337 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 FAM213BQ8TBF2 198 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 CA5BP1Q8WTZ4 195 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 SSX3Q99909 188 aa13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF716A6NP11 495 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 CHATP28329 748 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TAGLN2P37802 199 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 MAGEA5P43359 124 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 SSPNQ14714 243 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TSPO2Q5TGU0 170 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 ABHD17BQ5VST6 288 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TMEM182Q6ZP80 229 aaPredicted RBP13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 FNDC9Q8TBE3 224 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 ABHD5Q8WTS1 349 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TMEM38BQ9NVV0 291 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 FIGNL2A6NMB9 653 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 SNRPCP09234 159 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 CCL1P22362 96 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 MRPS34P82930 218 aaKnown RBP13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 PIGYQ3MUY2 71 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 SP6Q3SY56 376 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TGIF2LXQ8IUE1 241 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TOMM40LQ969M1 308 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 GINS3Q9BRX5 216 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 PECRQ9BY49 303 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 PRRG4Q9BZD6 226 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 TUBD1Q9UJT1 453 aa13.43□□□□□ -0.26
SHROOM1-201ENST00000319854 IGKV1-27A0A075B6S5 117 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF724A8MTY0 619 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 RPL36A-HNRNPH2H7BZ11 118 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 CYB5BO43169 146 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 HLA-HP01893 362 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 SERPINA7P05543 415 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 GSTP1P09211 210 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 ACP1P24666 158 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 RBMXP38159 391 aaKnown RBP13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 PKIAP61925 76 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 ZNF92Q03936 586 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 OR10AD1Q8NGE0 317 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 C1orf123Q9NWV4 160 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 B4E171 279 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 TSPAN7P41732 249 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 C4orf17Q53FE4 359 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 DHRS7CA6NNS2 312 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 PPP1R2P9O14990 202 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 FXYD4P59646 89 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 PLGLB1Q02325 96 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 BEND4Q6ZU67 534 aa13.42□□□□□ -0.26
SHROOM1-201ENST00000319854 HAS2Q92819 552 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms