RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NDUFAF3Q9BU61 184 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 DECR2Q9NUI1 292 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 TP53TG5Q9Y2B4 290 aa8.36□□□□□ -1.07
PTPRA-202ENST00000318266 IGKV1-27A0A075B6S5 117 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 MPPED1O15442 326 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 LINC01565O15544 149 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNHIT1O43257 154 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 OR7C1O76099 320 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 IL18BPO95998 194 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 OR4A8P0C604 315 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 MYF5P13349 255 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 CTHP32929 405 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 IDH3GP51553 393 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 NUTF2P61970 127 aaKnown RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 GRB2P62993 217 aaKnown RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 FAM69BQ5VUD6 431 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF66Q6ZN08 573 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 THADAQ6YHU6 1953 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF407Q9C0G0 2248 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 A0A1B0GU03 582 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 PPYP01298 95 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 COX5BP10606 129 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 SPINK2P20155 84 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 PMS2P11Q13670 270 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 RTP5Q14D33 572 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 SLC25A47Q6Q0C1 308 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 SLC16A14Q7RTX9 510 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 MYPOPQ86VE0 399 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 IL22RA1Q8N6P7 574 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 OR5R1Q8NH85 324 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 OR1L3Q8NH93 324 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM68Q96MH6 324 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 HIST1H2AAQ96QV6 131 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 LYRM2Q9NU23 88 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 PLA2G3Q9NZ20 509 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 LOC102723971A0A1B0GUV8 181 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 M0R135 149 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 CYB5R3P00387 301 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 PATE4P0C8F1 98 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 GABRG2P18507 467 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ELLP55199 621 aaPredicted RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 SLC10A1Q14973 349 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 PHYHD1Q5SRE7 291 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 TCEAL6Q6IPX3 200 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 Q6ZPA2 131 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ODF3L1Q8IXM7 274 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 CCDC71LQ8N9Z2 235 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 OR10A7Q8NGE5 316 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 OR1P1Q8NH06 330 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF799Q96GE5 643 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ELOVL1Q9BW60 279 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 TPSD1Q9BZJ3 242 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF286AQ9HBT8 521 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 RPRMQ9NS64 109 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 ST3GAL6Q9Y274 331 aa8.35□□□□□ -1.07
PTPRA-202ENST00000318266 KIAA2026Q5HYC2 2103 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 A0A1W2PPQ1 181 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 TRDCB7Z8K6 153 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 H3F3AP84243 136 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 FOXO1Q12778 655 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 PRAMEF20Q5VT98 475 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 SSX7Q7RTT5 188 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 LRTM2Q8N967 370 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 SNIP1Q8TAD8 396 aaKnown RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 PP6455Q8WZ26 134 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 RBMXL1Q96E39 390 aaKnown RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 GNPNAT1Q96EK6 184 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 RBM14Q96PK6 669 aaKnown RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 METTL7AQ9H8H3 244 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 SLC7A10Q9NS82 523 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 TTC28Q96AY4 2481 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 IGKV1-12A0A0C4DH73 117 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 MKRN2OSH3BPM6 223 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 IGKV1D-12P01611 117 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF25P17030 456 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 TNFRSF9Q07011 255 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 ZFP36L1Q07352 338 aaKnown RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 RTL6Q6ICC9 239 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 MOB3AQ96BX8 217 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF837Q96EG3 531 aaPredicted RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 BORCS8Q96FH0 119 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 KLHDC7BQ96G42 594 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 DKKL1Q9UK85 242 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 DIDO1Q9BTC0 2240 aaKnown RBP8.34□□□□□ -1.07
PTPRA-202ENST00000318266 FRYLO94915 3013 aa8.34□□□□□ -1.07
PTPRA-202ENST00000318266 BCL2P10415 239 aa8.33□□□□□ -1.08
PTPRA-202ENST00000318266 RSPO1Q2MKA7 263 aaPredicted RBP8.33□□□□□ -1.08
PTPRA-202ENST00000318266 C16orf82Q7Z2V1 217 aa8.33□□□□□ -1.08
PTPRA-202ENST00000318266 GAPTQ8N292 157 aa8.33□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF441Q8N8Z8 693 aa8.33□□□□□ -1.08
PTPRA-202ENST00000318266 SMRP1Q8NCR6 262 aa8.33□□□□□ -1.08
PTPRA-202ENST00000318266 OR10G3Q8NGC4 313 aa8.33□□□□□ -1.08
PTPRA-202ENST00000318266 POC1BQ8TC44 478 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms