RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 LOC105371242A0A075B767 164 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 UBAC2Q8NBM4 344 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 GNG10P50151 68 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 RPS11P62280 158 aaKnown RBP eCLIP7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 NKX6-1P78426 367 aaPredicted RBP7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 C3orf36Q3SXR2 165 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10AC1Q8NH08 325 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 NABP1Q96AH0 204 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 ADAT3Q96EY9 351 aaPredicted RBP7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 BANF2Q9H503 90 aa7.4□□□□□ -1.23
PDLIM5-201ENST00000317968 IGHV1-69-2A0A0G2JMI3 117 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 F5H5P2 479 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 FGF2P09038 288 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 IGFBP3P17936 291 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 ATXN7L3Q14CW9 347 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 YIPF5Q969M3 257 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 HEATR5AQ86XA9 2040 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 DFFBO76075 338 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 CRYGSP22914 178 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 PDZK1IP1Q13113 114 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF273Q14593 569 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNRF4Q8WWF5 429 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 ANKRD20A5PA0PJZ0 165 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 TMEM235A6NFC5 223 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 TRIM77I1YAP6 450 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 M0R1X1 148 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 LIPFP07098 398 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF431Q8TF32 576 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 CNTNAP3Q9BZ76 1288 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 IGKV1D-43A0A0B4J1Z2 117 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A1B0GTI1 187 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 HAND1O96004 215 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 MT-ND4P03905 459 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 CYB5R2Q6BCY4 276 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 GPX8Q8TED1 209 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF75AQ96N20 296 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 SPRR3Q9UBC9 169 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 hCG_38984A0A1B0GV85 526 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 VSIG8P0DPA2 414 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 BAK1Q16611 211 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 OR1L6Q8NGR2 347 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 DCTN5Q9BTE1 182 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 REPIN1Q9BWE0 567 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 TREM1Q9NP99 234 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 INSIG2Q9Y5U4 225 aa7.39□□□□□ -1.23
PDLIM5-201ENST00000317968 C1QTNF9BB2RNN3 333 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 B3GALNT1O75752 331 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 C1QTNF9P0C862 333 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 GLRXP35754 106 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 SHEQ5VZ18 495 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 PCSK4Q6UW60 755 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 OR1S2Q8NGQ3 325 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC7A6Q92536 515 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 NPAS1Q99742 590 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 MARVELD1Q9BSK0 173 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 PATE4P0C8F1 98 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 TAF9Q16594 264 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC38A6Q8IZM9 456 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 RGP1Q92546 391 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 NDUFB6O95139 128 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 NAAAQ02083 359 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 INSL4Q14641 139 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 TGIF2LYQ8IUE0 185 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 TGIF2LXQ8IUE1 241 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 OR10K1Q8NGX5 313 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 TERB2Q8NHR7 220 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 ABHD1Q96SE0 405 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 KLHDC3Q9BQ90 382 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 ALX4Q9H161 411 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 COA4Q9NYJ1 87 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 PURGQ9UJV8 347 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A1W2PNU3 283 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 A6NIN4 97 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 OTPQ5XKR4 325 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 C17orf50Q8WW18 174 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 ZNF714Q96N38 554 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 PIPOXQ9P0Z9 390 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 SRCAPQ6ZRS2 3230 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 A0A0G2JK05 382 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 TMEM14DPA8MWL7 114 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 OMGP23515 440 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 SLC6A1P30531 599 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 FAM3AP98173 230 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 SP5Q6BEB4 398 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 GCSAMQ8N6F7 178 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 OR52L2PQ8NGH6 319 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 MMP28Q9H239 520 aa7.38□□□□□ -1.23
PDLIM5-201ENST00000317968 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.38□□□□□ -1.231e-6■■■■■ 27
PDLIM5-201ENST00000317968 ADAMTS9Q9P2N4 1935 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 LEUTXA8MZ59 168 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 GAPDHP04406 335 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 OR8G5Q8NG78 346 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 SPSB4Q96A44 273 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 WBP1Q96G27 269 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 ELOVL1Q9BW60 279 aa7.37□□□□□ -1.23
PDLIM5-201ENST00000317968 BEX1Q9HBH7 125 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms