RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 TMED3Q9Y3Q3 217 aa12.87□□□□□ -0.35
TFE3-201ENST00000315869 AKAP6Q13023 2319 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 CER1O95813 267 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 CTSSP25774 331 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 HAAOP46952 286 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 S100A12P80511 92 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 RHEBQ15382 184 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 FADS6Q8N9I5 356 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 MSI2Q96DH6 328 aaKnown RBP12.86□□□□□ -0.35
TFE3-201ENST00000315869 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
TFE3-201ENST00000315869 OTOGLQ3ZCN5 2332 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 ZFP92A6NM28 416 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 AP4M1O00189 453 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 CD63P08962 238 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 DYNLT3P51808 116 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 RPL23AP62750 156 aaKnown RBP12.86□□□□□ -0.35
TFE3-201ENST00000315869 ZNF154Q13106 437 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 GAPTQ8N292 157 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 RDH5Q92781 318 aa12.86□□□□□ -0.35
TFE3-201ENST00000315869 HS3ST1O14792 307 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 CLN5O75503 358 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 SCTP09683 121 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 GPM6AP51674 278 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 H3F3AP84243 136 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 TMEM54Q969K7 222 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 SPIN2AQ99865 258 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 SPIN2BQ9BPZ2 258 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 GINS3Q9BRX5 216 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 IGF2RP11717 2491 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 DSPP15924 2871 aaKnown RBP12.85□□□□□ -0.35
TFE3-201ENST00000315869 IGLV3-32A0A0A0MS00 114 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 FAM157AC9JC47 383 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 H3BQ15 152 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 ETV2O00321 342 aaPredicted RBP12.85□□□□□ -0.35
TFE3-201ENST00000315869 FKBP2P26885 142 aaKnown RBP12.85□□□□□ -0.35
TFE3-201ENST00000315869 EIF2S3P41091 472 aaKnown RBP12.85□□□□□ -0.35
TFE3-201ENST00000315869 RAB5CP51148 216 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 RAC1P63000 192 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 PCOLCEQ15113 449 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 C9orf152Q5JTZ5 239 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 ZNF385CQ66K41 422 aaPredicted RBP12.85□□□□□ -0.35
TFE3-201ENST00000315869 THNSL2Q86YJ6 484 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 OR56B2PQ8NGI1 322 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 ABHD3Q8WU67 409 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 GALNT14Q96FL9 552 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 A0A0G2JMM0 328 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 A0A1W2PPB8 328 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 A0A1W2PRS3 328 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 KIR3DP1A8MWS1 328 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 CNOT4O95628 575 aaKnown RBP12.85□□□□□ -0.35
TFE3-201ENST00000315869 FUT6P51993 359 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 CMTM1Q8IZ96 169 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 TMEM252Q8N6L7 170 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 MOB3AQ96BX8 217 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 FAM86C1Q9NVL1 165 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 TMEM38BQ9NVV0 291 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 IL36RNQ9UBH0 155 aa12.85□□□□□ -0.35
TFE3-201ENST00000315869 TRAV39A0A0B4J263 110 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 RAB11AP62491 216 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 CYB561D1Q8N8Q1 229 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 LFNGQ8NES3 379 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 RAB39BQ96DA2 213 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 BOD1Q96IK1 185 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 LOC102725191A0A1B0GVB3 256 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 TERTO14746 1132 aaKnown RBP12.84□□□□□ -0.35
TFE3-201ENST00000315869 CHST1O43916 411 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 GDF1P27539 372 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 NTF4P34130 210 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 RND3P61587 244 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
TFE3-201ENST00000315869 ACER2Q5QJU3 275 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 ZNF429Q86V71 674 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 HSF4Q9ULV5 492 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 WSB1Q9Y6I7 421 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 A0A087WZY1 265 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 ZNF587BE7ETH6 402 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 SYNGR3O43761 229 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 CBR3O75828 277 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 UMODP07911 640 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 OR8U8P0C7N1 319 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 SP9P0CG40 484 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 RNF212Q495C1 297 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 HIST1H2AAQ96QV6 131 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 NIPSNAP3BQ9BS92 247 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 RNF122Q9H9V4 155 aa12.84□□□□□ -0.35
TFE3-201ENST00000315869 MED13Q9UHV7 2174 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms