RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 WDR74Q6RFH5 385 aaPredicted RBP10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 SELENOHQ8IZQ5 122 aaKnown RBP10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 MS4A6EQ96DS6 147 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 SPACA5Q96QH8 159 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 Q9N2K0 584 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 PRSS50Q9UI38 385 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 RHBDD3Q9Y3P4 386 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 VPS13AQ96RL7 3174 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 BPNT1O95861 308 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 RENP00797 406 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 CT45A8P0DMV1 189 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 CT45A9P0DMV2 189 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 SRSF4Q08170 494 aaKnown RBP10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 DEFB110Q30KQ9 67 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 TMEM176BQ3YBM2 270 aaPredicted RBP10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 CT45A2Q5DJT8 189 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 WBP2NLQ6ICG8 309 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 OR2AJ1Q8NGZ0 328 aa10.23□□□□□ -0.77
LDLRAD3-201ENST00000315571 FAM24AA6NFZ4 105 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 SERPINE3A8MV23 424 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 CTSVO60911 334 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 CD55P08174 381 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 FBLP22087 321 aaKnown RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 ZIC1Q15915 447 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 DPY19L2P2Q6ZN68 376 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 TMEM156Q8N614 296 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 TCTEX1D1Q8N7M0 179 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 NKAIN3Q8N8D7 197 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RCBTB1Q8NDN9 531 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 PTPMT1Q8WUK0 201 aaPredicted RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 MRPL24Q96A35 216 aaKnown RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 OR6C1Q96RD1 312 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 ARHGDIGQ99819 225 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RBKSQ9H477 322 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 TMEM106BQ9NUM4 274 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 CLN8Q9UBY8 286 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 OSGIN2Q9Y236 505 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 TMEM14AQ9Y6G1 99 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RALGAPA1Q6GYQ0 2036 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 GTF3C1Q12789 2109 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 IGHV5-51A0A0C4DH38 117 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 A0A1W2PQM1 296 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 SERTM1A2A2V5 107 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 CLEC3AO75596 197 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RUNX1Q01196 453 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 TMEM241Q24JQ0 296 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 WDR73Q6P4I2 378 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 CALHM1Q8IU99 346 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 OR52L2PQ8NGH6 319 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RNF128Q8TEB7 428 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 BANF2Q9H503 90 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 AURKAIP1Q9NWT8 199 aaPredicted RBP10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 KLHL13Q9P2N7 655 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 WASHC3Q9Y3C0 194 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 COX11Q9Y6N1 276 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 MAS1LP35410 378 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 CFHR1Q03591 330 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 RTP5Q14D33 572 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 PHF19Q5T6S3 580 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 KIR2DL5AQ8N109 375 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 ZNF619Q8N2I2 560 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 D2HGDHQ8N465 521 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 AQP3Q92482 292 aa10.22□□□□□ -0.77
LDLRAD3-201ENST00000315571 A0A0U1RQV5 110 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 C22orf46C9J442 243 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 MPZL1O95297 269 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 ACP1P24666 158 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 MARCH3Q86UD3 253 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 OR4B1Q8NGF8 309 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 MS4A8Q9BY19 250 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 LPAR5Q9H1C0 372 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 C5orf66Q9H5L9 145 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 FAM60AQ9NP50 221 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 PLA2G3Q9NZ20 509 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 MRM2Q9UI43 246 aaKnown RBP10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 RTTNQ86VV8 2226 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 DOCK11Q5JSL3 2073 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 A0A1W2PRS3 328 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 ZNF850A8MQ14 1090 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 C11orf98E9PRG8 122 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 H0YGG7 62 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 ONECUT2O95948 504 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 OTX2P32243 289 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 AMTP48728 403 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 CSNK1A1P48729 337 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 SMAGPQ0VAQ4 97 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 ACKR1Q16570 336 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 SMIM21Q3B7S5 101 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 PHLDA2Q53GA4 152 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 TMEM225Q6GV28 225 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 BORCS7Q96B45 105 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
LDLRAD3-201ENST00000315571 WNT10AQ9GZT5 417 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms