RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 Q56UQ5 140 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 ASCL5Q7RTU5 278 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 FBXL14Q8N1E6 418 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 MS4A3Q96HJ5 214 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 CACNG5Q9UF02 275 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 OPN4Q9UHM6 478 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 NAGKQ9UJ70 344 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 KCNE1BA0A087WTH5 132 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 GAGE10A6NGK3 116 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 CRHP06850 196 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 FAM157BP0CG42 384 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 TRAT1Q6PIZ9 186 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 OVCH2Q7RTZ1 564 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 EIF4E3Q8N5X7 224 aaKnown RBP7.24□□□□□ -1.25
VPS41-202ENST00000310301 C17orf47Q8NEP4 570 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 OR10V1Q8NGI7 309 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 C16orf52Q8NHV5 167 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.24□□□□□ -1.25
VPS41-202ENST00000310301 PLA2G3Q9NZ20 509 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 VAX2Q9UIW0 290 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 PTPRFP10586 1907 aa7.24□□□□□ -1.25
VPS41-202ENST00000310301 DEDDO75618 318 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CEACAM6P40199 344 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 IER3P46695 156 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 POLR2GP62487 172 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS41-202ENST00000310301 IL24Q13007 206 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ATP6V1FQ16864 119 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CYB5R2Q6BCY4 276 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 MOB3AQ96BX8 217 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 PIK3IP1Q96FE7 263 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 KCNK15Q9H427 330 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ICAM5Q9UMF0 924 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 FAM90A27PA6NNH2 459 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SIGLEC5O15389 551 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 PLA2G10O15496 165 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 RBP4P02753 201 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 DDTP30046 118 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 GUCA2BQ16661 112 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 MRPL54Q6P161 138 aaKnown RBP7.23□□□□□ -1.25
VPS41-202ENST00000310301 C6orf201Q7Z4U5 140 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 UBALD1Q8TB05 177 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ERRFI1Q9UJM3 462 aaPredicted RBP7.23□□□□□ -1.25
VPS41-202ENST00000310301 CXorf65A6NEN9 183 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CDK2AP1O14519 115 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CDC14BO60729 498 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 EFEMP2O95967 443 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CD59P13987 128 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 HLA-GP17693 338 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SUMO3P55854 103 aaPredicted RBP7.23□□□□□ -1.25
VPS41-202ENST00000310301 SCAND1P57086 179 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ANKRD37Q7Z713 158 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 PP6455Q8WZ26 134 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ST8SIA1Q92185 356 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 GPR61Q9BZJ8 451 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ZFP64Q9NPA5 681 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 HSPB8Q9UJY1 196 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SCN1AP35498 2009 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 PRR35P0CG20 571 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 MDKP21741 143 aaPredicted RBP7.23□□□□□ -1.25
VPS41-202ENST00000310301 G6PCP35575 357 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 UQCRFS1P47985 274 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CLDN15P56746 228 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 FOXO1Q12778 655 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS41-202ENST00000310301 KISS1Q15726 138 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 CLEC18BQ6UXF7 455 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ADAT3Q96EY9 351 aaPredicted RBP7.23□□□□□ -1.25
VPS41-202ENST00000310301 TMEM147Q9BVK8 224 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 OR2D2Q9H210 308 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 PARP11Q9NR21 331 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SLC7A10Q9NS82 523 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SIGLEC7Q9Y286 467 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 A0A1B0GTH9 108 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 PRR19A6NJB7 356 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 SNURFLB1AK76 121 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 TNFSF11O14788 317 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 APCSP02743 223 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 OR3A4PP47883 348 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 FUT7Q11130 342 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 FAHD2BQ6P2I3 314 aaPredicted RBP7.23□□□□□ -1.25
VPS41-202ENST00000310301 LIAT1Q6ZQX7 453 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 RNF165Q6ZSG1 346 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 ZNF547Q8IVP9 402 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 NOXO1Q8NFA2 376 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 OR52L2PQ8NGH6 319 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 FAHD2AQ96GK7 314 aa7.23□□□□□ -1.25
VPS41-202ENST00000310301 HOXB3P14651 431 aaPredicted RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 OPRK1P41145 380 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 LSM11P83369 360 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS41-202ENST00000310301 CFHR1Q03591 330 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 COX19Q49B96 90 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 SPATA45Q537H7 98 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 C16orf82Q7Z2V1 217 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 OR4F17Q8NGA8 305 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 ZNF638Q14966 1978 aaKnown RBP7.22□□□□□ -1.25
VPS41-202ENST00000310301 FAM74A7A6NL05 159 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 F5H697 171 aa7.22□□□□□ -1.25
VPS41-202ENST00000310301 EIF3GO75821 320 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS41-202ENST00000310301 CD160O95971 181 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms