RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CHCHD3Q9NX63 227 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-202ENST00000308537 IL36GQ9NZH8 169 aa15.94■□□□□ 0.14
PDZRN3-202ENST00000308537 CNOT2Q9NZN8 540 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-202ENST00000308537 NKX1-2Q9UD57 310 aaPredicted RBP15.94■□□□□ 0.14
PDZRN3-202ENST00000308537 TRAV8-7A0A075B6U6 113 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TRGV10A0A0A0MS01 117 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TRBV5-7A0A0A0MS05 114 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 CDRT1O95170 752 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TSPAN15O95858 294 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 CD2P06729 351 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 MYL12AP19105 171 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 PTGFRP43088 359 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 BDH1Q02338 343 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 DYNC1I2Q13409 638 aaKnown RBP15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 NHLRC3Q5JS37 347 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 RSBN1Q5VWQ0 802 aaPredicted RBP15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 Q6ZS46 218 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TRAPPC6BQ86SZ2 158 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TMEM219Q86XT9 240 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 OR13A1Q8NGR1 328 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 CFHR4Q92496 578 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TFAP2CQ92754 450 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 NCOR1P1Q9H4R4 102 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 TMEM138Q9NPI0 162 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 FOXJ3Q9UPW0 622 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 HILPDAQ9Y5L2 63 aa15.93■□□□□ 0.14
PDZRN3-202ENST00000308537 A0A1W2PP11 408 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 FAM172BPA6NC97 362 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 TIMM23O14925 209 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 HABP2Q14520 560 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 Q499Y3 187 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 DDI2Q5TDH0 399 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 SATL1Q86VE3 508 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 ABHD12Q8N2K0 398 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 OR4C13Q8NGP0 309 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 NR1H4Q96RI1 486 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 GAL3ST2Q9H3Q3 398 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 IFT22Q9H7X7 185 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 KIF25Q9UIL4 384 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 PCDHGB5Q9Y5G0 923 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 NOTCH3Q9UM47 2321 aa15.92■□□□□ 0.14
PDZRN3-202ENST00000308537 FUOMA2VDF0 154 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 EFCAB10A6NFE3 127 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 ZNF729A6NN14 1252 aaPredicted RBP15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 LY6LH3BQJ8 138 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 M0QZ24 198 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 HSPB6O14558 160 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 PIN1P1O15428 100 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 FSTP19883 344 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 BDKRB2P30411 391 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 ZNF93P35789 620 aaPredicted RBP15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 YIF1BQ5BJH7 314 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 RTN4RL2Q86UN3 420 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 NRG4Q8WWG1 115 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 CPNE2Q96FN4 548 aaPredicted RBP15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 KIRREL1Q96J84 757 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 GPER1Q99527 375 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 NPFFR1Q9GZQ6 430 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 MMP27Q9H306 513 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 ING3Q9NXR8 418 aa15.91■□□□□ 0.14
PDZRN3-202ENST00000308537 KBTBD11-OT1A0A1B0GTJ5 212 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 NPIPB11E5RHQ5 1161 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 HTR1DP28221 377 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 RBM11P57052 281 aaKnown RBP15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 RIPK1Q13546 671 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 HLA-DRB5Q30154 266 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 PAN3Q58A45 887 aaKnown RBP15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 OR52W1Q6IF63 320 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 AHSA2Q719I0 299 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 KLHDC1Q8N7A1 406 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 OR14A2Q96R54 314 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 ZNF184Q99676 751 aaPredicted RBP15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 FAM192AQ9GZU8 254 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 DPM3Q9P2X0 92 aa15.9■□□□□ 0.14
PDZRN3-202ENST00000308537 MAGEB3O15480 346 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 HTR3BO95264 441 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 CD1AP06126 327 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 BLCAPP62952 87 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 HERPUD1Q15011 391 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 RSU1Q15404 277 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 C11orf88Q6PI97 169 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 NANOGP1Q8N7R0 232 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 OR2T6Q8NHC8 308 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 NDNFQ8TB73 568 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 CYYR1Q96J86 154 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 WNT10AQ9GZT5 417 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 OR6C3Q9NZP0 311 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 ST3GAL6Q9Y274 331 aa15.89■□□□□ 0.13
PDZRN3-202ENST00000308537 GEMIN2O14893 280 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 GP2P55259 537 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 WNT4P56705 351 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 PPP3R1P63098 170 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 OSR2Q8N2R0 312 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 SUMF2Q8NBJ7 301 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 BPIFB6Q8NFQ5 453 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 SGCDQ92629 289 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 DERL3Q96Q80 235 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 ABCB10Q9NRK6 738 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 CALYQ9NYX4 217 aa15.88■□□□□ 0.13
PDZRN3-202ENST00000308537 PITPNC1Q9UKF7 332 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms