RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SCARB1Q8WTV0 552 aa19.06■□□□□ 0.64
PDLIM2-202ENST00000308354 DUSP13Q9UII6 198 aa19.06■□□□□ 0.64
PDLIM2-202ENST00000308354 OR2F2O95006 317 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 CCKARP32238 428 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 OR2F1Q13607 317 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 MPV17LQ2QL34 196 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 VHLLQ6RSH7 139 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 ZNF826PQ6ZT77 177 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 METTL8Q9H825 291 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 RCC2Q9P258 522 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 IFNA2P01563 188 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 RLN2P04090 185 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 FXYD4P59646 89 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 TMEM211Q6ICI0 200 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 ACOT7LQ6ZUV0 252 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 SUMF2Q8NBJ7 301 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 OR10C1Q96KK4 312 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 KIF25Q9UIL4 384 aa19.05■□□□□ 0.64
PDLIM2-202ENST00000308354 TUBAL3A6NHL2 446 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 KITLGP21583 273 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 FCGR2CP31995 323 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 CYCSP99999 105 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 RGS7BPQ6MZT1 257 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 FAM219AQ8IW50 185 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 RELL2Q8NC24 303 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 POM121Q96HA1 1249 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 ADGRG4Q8IZF6 3080 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 TRAV24A0A0B4J272 114 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 KANTRA0A1W2PQU2 76 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 CRYAAP02489 173 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 NMBP08949 121 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 HOXB5P09067 269 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 RRASP10301 218 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 PRAMEF6Q5VXH4 476 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 MBNL2Q5VZF2 373 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 GTF3AQ92664 365 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 PLK3Q9H4B4 646 aa19.04■□□□□ 0.64
PDLIM2-202ENST00000308354 RELNP78509 3460 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 TEX13DA0A0J9YY54 714 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 CRYM-AS1A6NIL9 109 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 ZNF728P0DKX0 622 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 ZNF44P15621 663 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 PMELP40967 661 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 MRGPRGQ86SM5 289 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 SGPP2Q8IWX5 399 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 UFSP2Q9NUQ7 469 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 POLDIP2Q9Y2S7 368 aa19.03■□□□□ 0.64
PDLIM2-202ENST00000308354 ATP6V1G2-DDX39BF2Z307 99 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 BCL2L11O43521 198 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 PIGPP57054 158 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 IGSF11Q5DX21 431 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 TOR2AQ5JU69 321 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 INO80EQ8NBZ0 244 aaPredicted RBP19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 ST8SIA2Q92186 375 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 RNF126Q9BV68 326 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 PIGMQ9H3S5 423 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 H0YIZ8 118 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 NXPH2O95156 264 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 ERVK11-1P61568 191 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 DCUN1D4Q92564 292 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 CXorf58Q96LI9 332 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 NRIP2Q9BQI9 281 aa19.02■□□□□ 0.64
PDLIM2-202ENST00000308354 A6NLC8 198 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 SIRPB1O00241 398 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 DEGS1O15121 323 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 PGA5P0DJD9 388 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 C20orf204Q6ZNR8 217 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 C11orf53Q8IXP5 236 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 DHRS9Q9BPW9 319 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 PRSS44E7EML9 344 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 WNT9BO14905 357 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 NAPSAO96009 420 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 TUBG1P23258 451 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 LUMP51884 338 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 P2RX3P56373 397 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 UBA52P62987 128 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 SYT3Q9BQG1 590 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 CXXC4Q9H2H0 198 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 TUBG2Q9NRH3 451 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 C1orf123Q9NWV4 160 aa19.01■□□□□ 0.63
PDLIM2-202ENST00000308354 TMEM210A6NLX4 147 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 RBPJQ06330 500 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 IL13RA2Q14627 380 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 THOC7Q6I9Y2 204 aaKnown RBP19■□□□□ 0.63
PDLIM2-202ENST00000308354 Q6P435 159 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 POC1AQ8NBT0 407 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 C2orf50Q96LR7 162 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 DMRTA2Q96SC8 542 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 ZNF471Q9BX82 626 aaPredicted RBP19■□□□□ 0.63
PDLIM2-202ENST00000308354 TRBV6-7A0A0A0MS04 114 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 SCTP09683 121 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 CEBPDP49716 269 aaPredicted RBP19■□□□□ 0.63
PDLIM2-202ENST00000308354 RBM39Q14498 530 aaKnown RBP19■□□□□ 0.63
PDLIM2-202ENST00000308354 ABCA11PQ4W5N1 156 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 PHLDA2Q53GA4 152 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 LINC00596Q86U02 117 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 OR2Z1Q8NG97 314 aa19■□□□□ 0.63
PDLIM2-202ENST00000308354 RRNAD1Q96FB5 475 aaKnown RBP19■□□□□ 0.63
PDLIM2-202ENST00000308354 Q9N2K0 584 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms