RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 UNQ5815/PRO19632Q6UWF5 114 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 HEPN1Q6WQI6 88 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 RAB37Q96AX2 223 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 ADGRL4Q9HBW9 690 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 PPT2Q9UMR5 302 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 CD74P04233 296 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 ZNF17P17021 662 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 FOXK2Q01167 660 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 CACNA1IQ9P0X4 2223 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 NPIPB7O75200 414 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 HIST1H1EP10412 219 aaKnown RBP13.54□□□□□ -0.24
LEMD3-201ENST00000308330 HTR1DP28221 377 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 MORN4Q8NDC4 146 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 PTPMT1Q8WUK0 201 aaPredicted RBP13.54□□□□□ -0.24
LEMD3-201ENST00000308330 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.54□□□□□ -0.24
LEMD3-201ENST00000308330 SGCZQ96LD1 299 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 TNFRSF13CQ96RJ3 184 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 KIAA1456Q9P272 454 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 CA2P00918 260 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
LEMD3-201ENST00000308330 RTN4RL2Q86UN3 420 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 LOXL4Q96JB6 756 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 SDF2Q99470 211 aa13.54□□□□□ -0.24
LEMD3-201ENST00000308330 GEMIN7Q9H840 131 aaKnown RBP13.54□□□□□ -0.24
LEMD3-201ENST00000308330 OR4C45A6NMZ5 311 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 TNFSF13O75888 250 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 F2RP25116 425 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 TIAL1Q01085 375 aaKnown RBP eCLIP13.53□□□□□ -0.24
LEMD3-201ENST00000308330 HES1Q14469 280 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 HIKESHIQ53FT3 197 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 Q8WTZ3 238 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 CTSVO60911 334 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 RNASE8Q8TDE3 154 aaKnown RBP13.53□□□□□ -0.24
LEMD3-201ENST00000308330 DNASE2BQ8WZ79 361 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 COX14Q96I36 57 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 NXF5Q9H1B4 397 aaKnown RBP13.53□□□□□ -0.24
LEMD3-201ENST00000308330 B3GAT1Q9P2W7 334 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 SPTBP11277 2137 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 ZC3H12DA2A288 527 aaKnown RBP13.53□□□□□ -0.24
LEMD3-201ENST00000308330 KLK8O60259 260 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 AMBPP02760 352 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 PCBD1P61457 104 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 OR5D14Q8NGL3 314 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 ERGIC1Q969X5 290 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 ADAT3Q96EY9 351 aaPredicted RBP13.53□□□□□ -0.24
LEMD3-201ENST00000308330 RSPO3Q9BXY4 272 aaPredicted RBP13.53□□□□□ -0.24
LEMD3-201ENST00000308330 S1PR5Q9H228 398 aa13.53□□□□□ -0.24
LEMD3-201ENST00000308330 LOC102725191A0A1B0GVB3 256 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 DNPH1O43598 174 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 NUDT3O95989 172 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 OR4A8P0C604 315 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 SRSF3P84103 164 aaKnown RBP13.52□□□□□ -0.24
LEMD3-201ENST00000308330 ASB5Q8WWX0 329 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 CACNA1BQ00975 2339 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 TRAV36DV7A0A075B6V5 113 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 GDF9O60383 454 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 CA1P00915 261 aaPredicted RBP13.52□□□□□ -0.24
LEMD3-201ENST00000308330 TCTAP57738 103 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 COL10A1Q03692 680 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 OR1L3Q8NH93 324 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 JKAMPQ9P055 326 aa13.52□□□□□ -0.24
LEMD3-201ENST00000308330 EIF4E2O60573 245 aaKnown RBP13.52□□□□□ -0.25
LEMD3-201ENST00000308330 PSG1P11464 419 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 WDR25Q64LD2 544 aaPredicted RBP13.52□□□□□ -0.25
LEMD3-201ENST00000308330 LINC01555Q8NAE3 123 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 OR4D9Q8NGE8 314 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 VCX2Q9H322 139 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 H7C1C5 153 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 TIGITQ495A1 244 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 AMMECR1LQ6DCA0 310 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 RBM45Q8IUH3 476 aaKnown RBP13.52□□□□□ -0.25
LEMD3-201ENST00000308330 SYS1Q8N2H4 156 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 SLC35A4Q96G79 324 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 OR4C12Q96R67 309 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 TMEM59Q9BXS4 323 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.25
LEMD3-201ENST00000308330 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.25
LEMD3-201ENST00000308330 ZNF638Q14966 1978 aaKnown RBP13.51□□□□□ -0.25
LEMD3-201ENST00000308330 PLPP2O43688 288 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 SFT2D2O95562 160 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 IGHV3-9P01782 118 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 CEACAM1P13688 526 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 PPP1CAP62136 330 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 MUC15Q8N387 334 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 STXBP6Q8NFX7 210 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 SARAFQ96BY9 339 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 TSSK2Q96PF2 358 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 C12orf49Q9H741 205 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 PIPOXQ9P0Z9 390 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 COL11A1P12107 1806 aaPredicted RBP13.51□□□□□ -0.25
LEMD3-201ENST00000308330 A0A1B0GTL3 188 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 ABHD16AO95870 558 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 PMS2CLQ68D20 193 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 CHST6Q9GZX3 395 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 ELOVL3Q9HB03 270 aa13.51□□□□□ -0.25
LEMD3-201ENST00000308330 RCL1Q9Y2P8 373 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms