RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 UBE2V2Q15819 145 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 SIGLEC12Q96PQ1 595 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 WNT5BQ9H1J7 359 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ELF5Q9UKW6 265 aaPredicted RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 TRAV39A0A0B4J263 110 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 FCGR3BO75015 233 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 MBP02144 154 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 TAGLNQ01995 201 aaKnown RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZNF787Q6DD87 383 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 RPL7L1Q6DKI1 246 aaKnown RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 C14orf79Q96F83 325 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 GPR37O15354 613 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 ACKR3P25106 362 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 FOXO1Q12778 655 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 PXDC1Q5TGL8 231 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 LYG1Q8N1E2 194 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR5D13Q8NGL4 314 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 CCL17Q92583 94 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 CORO2AQ92828 525 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 NPDC1Q9NQX5 325 aaPredicted RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 MT-ND4LP03901 98 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 DEFA4P12838 97 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 DCAF12L2Q5VW00 463 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 IL34Q6ZMJ4 242 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 MYOZ1Q9NP98 299 aaPredicted RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 FAM90A27PA6NNH2 459 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM14DPA8MWL7 114 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 PRR33A8MZF0 331 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 SCAF4O95104 1147 aaKnown RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 PMELP40967 661 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 SUCLG1P53597 346 aaKnown RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 CACNA1DQ01668 2161 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 ENDOGQ14249 297 aaKnown RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM255AQ5JRV8 349 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 UQCC3Q6UW78 93 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 RXFP4Q8TDU9 374 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZNF703Q9H7S9 590 aaPredicted RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 C19orf12Q9NSK7 152 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR6C3Q9NZP0 311 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 DOCK9Q9BZ29 2069 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 AHRRA9YTQ3 701 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 FGF12P61328 243 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 HLA-DRB3P79483 266 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 ERHP84090 104 aaKnown RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 PJVKQ0ZLH3 352 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 P2RY6Q15077 328 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 LINC00596Q86U02 117 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 DHRS9Q9BPW9 319 aa9.91□□□□□ -0.82
PCDHGC3-201ENST00000308177 A0A0G2JMM0 328 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 A0A1W2PPB8 328 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 A0A1W2PRS3 328 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM210A6NLX4 147 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 KIR3DP1A8MWS1 328 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 NTN3O00634 580 aaPredicted RBP9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 KLF7O75840 302 aaPredicted RBP9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 UCP2P55851 309 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 ADAM5Q6NVV9 412 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 TIPARPQ7Z3E1 657 aaKnown RBP9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 LYZL2Q7Z4W2 148 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 PRDM14Q9GZV8 571 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 GPR132Q9UNW8 380 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 URGCP-MRPS24S4R325 110 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 ADAM10O14672 748 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 CELA3AP09093 270 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 MIDNQ504T8 468 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 MOGAT3Q86VF5 341 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 TRAF4Q9BUZ4 470 aaPredicted RBP9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR2W1Q9Y3N9 320 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 IGLV3-32A0A0A0MS00 114 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 UBE2L5PA0A1B0GUS4 154 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 RAB19A4D1S5 217 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 OOEPA6NGQ2 149 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 PRR32B1ATL7 298 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 RNASEK-C17orf49H0YIS7 233 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZP3P21754 424 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 GNG10P50151 68 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 FAM3AP98173 230 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM267Q0VDI3 215 aaPredicted RBP9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 CSRP2Q16527 193 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 FAM122CQ6P4D5 195 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR4A4PQ8NGN8 299 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR1K1Q8NGR3 316 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 MRPL13Q9BYD1 178 aaKnown RBP9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 FAM117AQ9C073 453 aa9.9□□□□□ -0.82
PCDHGC3-201ENST00000308177 MDFIC2A0A1B0GVS7 189 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 IGHV3-13P01766 116 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 IGHV3-7P01780 117 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 COX5BP10606 129 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 RAB7AP51149 207 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 GABRA6Q16445 453 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 COMMD1Q8N668 190 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 RND1Q92730 232 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 TIMP4Q99727 224 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 ZNF355PQ9NSJ1 428 aa9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 TIMM8BQ9Y5J9 83 aaPredicted RBP9.9□□□□□ -0.83
PCDHGC3-201ENST00000308177 hADV38S2A0JD32 116 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 ZNF727A8MUV8 499 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms