RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HINT2Q9BX68 163 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 ZNF665Q9H7R5 613 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 DEDDO75618 318 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 DHRS3O75911 302 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 CD63P08962 238 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 RAB5CP51148 216 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 CST9LP1Q5W188 147 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 TMPRSS7Q7RTY8 843 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 ST8SIA1Q92185 356 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 NTNG2Q96CW9 530 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 AQP10Q96PS8 301 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 GFOD1Q9NXC2 390 aa12.65□□□□□ -0.38
PTPN9-201ENST00000306726 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
PTPN9-201ENST00000306726 GAMTQ14353 236 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 C21orf62-AS1Q17RA5 79 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 OXGR1Q96P68 337 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 PMS2P1A4D2B8 440 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 C5orf49A4QMS7 147 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 RBFOX3A6NFN3 312 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 SNCAP37840 140 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 RND3P61587 244 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
PTPN9-201ENST00000306726 LINC00469Q8N7U9 141 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 C15orf54Q8N8G6 183 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 CARHSP1Q9Y2V2 147 aaKnown RBP12.64□□□□□ -0.39
PTPN9-201ENST00000306726 FAM166BA8MTA8 275 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 NPIPB7O75200 414 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 S100A8P05109 93 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 FCGR3AP08637 254 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 OR8U8P0C7N1 319 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 PGA5P0DJD9 388 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 TBC1D26Q86UD7 250 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 ABHD3Q8WU67 409 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
PTPN9-201ENST00000306726 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
PTPN9-201ENST00000306726 SPINK4O60575 86 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 SNRPCP09234 159 aaKnown RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 OSR2Q8N2R0 312 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 OSGIN2Q9Y236 505 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CLDN1O95832 211 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CCL4P13236 92 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CD59P13987 128 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF17P17021 662 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 GDF1P27539 372 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 EXTL1Q92935 676 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 TIMM8BQ9Y5J9 83 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 LY6G6EA0A0G2JKS1 128 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 FIGNL2A6NMB9 653 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 SIRPB1O00241 398 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 TAAR5O14804 337 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ISG15P05161 165 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CXCL1P09341 107 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CCL7P80098 99 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 PLPPR5Q32ZL2 321 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CCDC54Q8NEL0 328 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 STRADBQ9C0K7 418 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 U3KQA8 63 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CDX4O14627 284 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 CARD18P57730 90 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 RPS23P62266 143 aaKnown RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 TCEAL6Q6IPX3 200 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 DPPA2Q7Z7J5 298 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 MRPL41Q8IXM3 137 aaKnown RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ARHGEF39Q8N4T4 335 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF610Q8N9Z0 462 aa12.63□□□□□ -0.39
PTPN9-201ENST00000306726 ERRFI1Q9UJM3 462 aaPredicted RBP12.63□□□□□ -0.39
PTPN9-201ENST00000306726 C3orf85A0A1B0GTC6 90 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 SERPINE3A8MV23 424 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 F8VVB4 439 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 F8VWA3 439 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 MELTFP08582 738 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 TBPP20226 339 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 GRB2P62993 217 aaKnown RBP12.62□□□□□ -0.39
PTPN9-201ENST00000306726 FAHD2BQ6P2I3 314 aaPredicted RBP12.62□□□□□ -0.39
PTPN9-201ENST00000306726 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 LINC00696Q6ZRV3 163 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 FAHD2AQ96GK7 314 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 SSX3Q99909 188 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 SLC25A22Q9H936 323 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 ACACAQ13085 2346 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 KRASP01116 189 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 ZNF92Q03936 586 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 RNF212Q495C1 297 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 CALHM1Q8IU99 346 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 POC1BQ8TC44 478 aa12.62□□□□□ -0.39
PTPN9-201ENST00000306726 CCNL2Q96S94 520 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms