RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PPYP01298 95 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 GRPP07492 148 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 PGA5P0DJD9 388 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 RCC1P18754 421 aaPredicted RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 TIMP3P35625 211 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 KCNJ3P48549 501 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 UCP3P55916 312 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ZNF345Q14585 488 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 MSMPQ1L6U9 139 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 PHLDA2Q53GA4 152 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ALKAL2Q6UX46 152 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 C22orf34Q6ZV56 151 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 SGPP2Q8IWX5 399 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 OR8G5Q8NG78 346 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 RTN4IP1Q8WWV3 396 aaPredicted RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 GTF3AQ92664 365 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 S100PBPQ96BU1 408 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 VRK1Q99986 396 aaPredicted RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 RSRP1Q9BUV0 290 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 METTL8Q9H825 291 aaKnown RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 OBP2BQ9NPH6 170 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 TRBV6-6A0A0A6YYG2 114 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 A0A0D9SG52 128 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 TEX13DA0A0J9YY54 714 aaPredicted RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 C1QTNF9BB2RNN3 333 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 TRDCB7Z8K6 153 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 OR2F2O95006 317 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 GLI4P10075 376 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 CTRB1P17538 263 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 KITLGP21583 273 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 GNRHRP30968 328 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 CEACAM8P31997 349 aaPredicted RBP5.55□□□□□ -1.52
USP47-201ENST00000305481 FABP6P51161 128 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 TDGF1P3P51864 188 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 OR2F1Q13607 317 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 TMEM187Q14656 261 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 OR8G1Q15617 311 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 KRTCAP3Q53RY4 240 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 CTRB2Q6GPI1 263 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ZNF880Q6PDB4 577 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 PCSK4Q6UW60 755 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ZNF826PQ6ZT77 177 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ACOT7LQ6ZUV0 252 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 LDLRAD3Q86YD5 345 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 FAM169BQ8N8A8 192 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 THAP6Q8TBB0 222 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 FAM57AQ8TBR7 257 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 NEK7Q8TDX7 302 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 PIK3IP1Q96FE7 263 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 NAA60Q9H7X0 242 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 RHOFQ9HBH0 211 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 SPACA1Q9HBV2 294 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 TMEM100Q9NV29 134 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 OR5AC2Q9NZP5 309 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ATP23Q9Y6H3 246 aa5.55□□□□□ -1.52
USP47-201ENST00000305481 ZZEF1O43149 2961 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 IGKV1D-13A0A0B4J2D9 117 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 SLC33A1O00400 549 aaPredicted RBP5.54□□□□□ -1.52
USP47-201ENST00000305481 DEGS1O15121 323 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 BET1O15155 118 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 SPDEFO95238 335 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 OR2H2O95918 312 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 RLN2P04090 185 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 OR5AC1P0C628 307 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 IGKV1-13P0DP09 117 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 BPIFB3P59826 476 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 CYCSP99999 105 aaKnown RBP5.54□□□□□ -1.52
USP47-201ENST00000305481 TBR1Q16650 682 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 GLYATL2Q8WU03 294 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 MRPL24Q96A35 216 aaKnown RBP5.54□□□□□ -1.52
USP47-201ENST00000305481 GALNT14Q96FL9 552 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 C2orf50Q96LR7 162 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 HES4Q9HCC6 221 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 MSL2Q9HCI7 577 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 C1orf123Q9NWV4 160 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 RASL12Q9NYN1 266 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 ARID1AO14497 2285 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 ADGRG4Q8IZF6 3080 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 TRAV39A0A0B4J263 110 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 A0A1B0GWJ7 208 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 TUSC2O75896 110 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 GLAP06280 429 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 LYL1P12980 280 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 ZNF44P15621 663 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 NAAAQ02083 359 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 NHLH1Q02575 133 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 RAB32Q13637 225 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 ZNF146Q15072 292 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 MBNL2Q5VZF2 373 aaKnown RBP5.54□□□□□ -1.52
USP47-201ENST00000305481 SLC51BQ86UW2 128 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 OR5T2Q8NGG2 359 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 PLPPR1Q8TBJ4 325 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 BCL2L14Q9BZR8 327 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 POLDIP2Q9Y2S7 368 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 AMDHD2Q9Y303 409 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 CADP27708 2225 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 MSGN1A6NI15 193 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 TMEM210A6NLX4 147 aa5.54□□□□□ -1.52
USP47-201ENST00000305481 POM121CA8CG34 1229 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms