RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 SWI5Q1ZZU3 235 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 TOR2AQ5JU69 321 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 COLCA1Q6ZS62 124 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 WNT2BQ93097 391 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 SDHAF2Q9NX18 166 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 ATRXP46100 2492 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 DMXL1Q9Y485 3027 aa12.9□□□□□ -0.34
PPP4R4-201ENST00000304338 SMPD2O60906 423 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TPT1P13693 172 aaKnown RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 MPV17P39210 176 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 SELENOVP59797 346 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 PSG7Q13046 419 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 GABRA6Q16445 453 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TMEM211Q6ICI0 200 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 SCCPDHQ8NBX0 429 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TNFSF18Q9UNG2 199 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 J3QT63 122 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 SH2D1BO14796 132 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 CST4P01036 141 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 NAT1P18440 290 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 ACSF3Q4G176 576 aaPredicted RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 BHLHA15Q7RTS1 189 aaPredicted RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TPRX1Q8N7U7 411 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 RFESDQ8TAC1 157 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TREM2Q9NZC2 230 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 BCL2L11O43521 198 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TUSC2O75896 110 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 TFF1P04155 84 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 OR8U9P0C7N5 309 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 OR2B11Q5JQS5 317 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 RPRMLQ8N4K4 120 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 OR8U1Q8NH10 309 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 RBPMSQ93062 196 aaKnown RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 PLK3Q9H4B4 646 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 CCL28Q9NRJ3 127 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
PPP4R4-201ENST00000304338 SPRY3O43610 288 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 GAPTQ8N292 157 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 K7EM74 188 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 AQP7O14520 342 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 PRRG2O14669 202 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 PTPRQQ9UMZ3 2332 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 ZNF292O60281 2723 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 PCSK5Q92824 1860 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 WNT9BO14905 357 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 CRYABP02511 175 aaKnown RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 ZNF154Q13106 437 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 ASCL5Q7RTU5 278 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 HRH4Q9H3N8 390 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 CECR9P0C854 216 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 NSUN5P2Q63ZY6 315 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 RGS7BPQ6MZT1 257 aaPredicted RBP12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 KCNRGQ8N5I3 272 aa12.88□□□□□ -0.35
PPP4R4-201ENST00000304338 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 ZNF808Q8N4W9 903 aaPredicted RBP12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 ABHD17AQ96GS6 310 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 LIME1Q9H400 295 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 IGHV3-13P01766 116 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 IGHV3-7P01780 117 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 RPL12P30050 165 aaKnown RBP12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 CLINT1Q14677 625 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 BEND4Q6ZU67 534 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 WFDC8Q8IUA0 241 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 RASL12Q9NYN1 266 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 PVALBP20472 110 aaPredicted RBP12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 AKAP6Q13023 2319 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 AANATQ16613 207 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 LHFPL1Q86WI0 220 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 TMEM217Q8N7C4 229 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 FGF23Q9GZV9 251 aaPredicted RBP12.87□□□□□ -0.35
PPP4R4-201ENST00000304338 C3orf85A0A1B0GTC6 90 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 B8ZZF3 427 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 EDDM3BP56851 147 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 TBC1D26Q86UD7 250 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 ASB13Q8WXK3 278 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 NMES1Q9C002 83 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 DSPP15924 2871 aaKnown RBP12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 OR2H2O95918 312 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 CD8AP01732 235 aa12.86□□□□□ -0.35
PPP4R4-201ENST00000304338 RAC2P15153 192 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms