RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CYB5BO43169 146 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 GCNT2Q8N0V5 402 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 SEC11CQ9BY50 192 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 OPA3Q9H6K4 179 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 UBE2CO00762 179 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 METTL15P1P0C7V9 234 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 RAC2P15153 192 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 RAB1AP62820 205 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 RELQ04864 619 aaPredicted RBP12.23□□□□□ -0.45
SDC2-201ENST00000302190 CSRP2Q16527 193 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 OR2C3Q8N628 320 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 RFESDQ8TAC1 157 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 OR5B12Q96R08 314 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 CACNA1BQ00975 2339 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 AP4M1O00189 453 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 DEGS1O15121 323 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 NPIPB7O75200 414 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 KRASP01116 189 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 CD8AP01732 235 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 CLPSP04118 112 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 EPHA8P29322 1005 aaPredicted RBP12.23□□□□□ -0.45
SDC2-201ENST00000302190 ZNF239Q16600 458 aaKnown RBP12.23□□□□□ -0.45
SDC2-201ENST00000302190 DHRS11Q6UWP2 260 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 OR52M1Q8NGK5 317 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 TMEM131Q92545 1883 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 UTP23Q9BRU9 249 aaKnown RBP12.23□□□□□ -0.45
SDC2-201ENST00000302190 DUSP13Q9UII6 198 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 IGKV1-9A0A0C4DH69 117 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 MBP02144 154 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 IGFBP3P17936 291 aaPredicted RBP12.23□□□□□ -0.45
SDC2-201ENST00000302190 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 UBALD2Q8IYN6 164 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 CHST5Q9GZS9 411 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 CCL28Q9NRJ3 127 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 SLC39A9Q9NUM3 307 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
SDC2-201ENST00000302190 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 A0A1W2PPE3 182 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 CA6P23280 308 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 GABRA2P47869 451 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 TAS2R60P59551 318 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 ZNF92Q03936 586 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 ZNF154Q13106 437 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 RNF126Q9BV68 326 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 SLC7A10Q9NS82 523 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 ABCA4P78363 2273 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 CXorf65A6NEN9 183 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 PDCD6O75340 191 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 HNF1AP20823 631 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 PPP1CCP36873 323 aaKnown RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 NPBWR2P48146 333 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 GSK3AP49840 483 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 SPCS3P61009 180 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 CLN3Q13286 438 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 C1orf210Q8IVY1 113 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 WDFY1Q8IWB7 410 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 GAPTQ8N292 157 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 OR10D4PQ8NGN7 298 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 SPSB1Q96BD6 273 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 NUDT19A8MXV4 375 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 MBPP02686 304 aaPredicted RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 ZNF574Q6ZN55 896 aaPredicted RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 MYPOPQ86VE0 399 aaPredicted RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 OR1J1Q8NGS3 322 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 OR2V1Q8NHB1 315 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 CLDN23Q96B33 292 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 GAR1Q9NY12 217 aaKnown RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 B3GAT1Q9P2W7 334 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
SDC2-201ENST00000302190 FZR1Q9UM11 496 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 WASF3Q9UPY6 502 aa12.22□□□□□ -0.45
SDC2-201ENST00000302190 TLE4Q04727 773 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 TBC1D26Q86UD7 250 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 HPSE2Q8WWQ2 592 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 A0A087X0M5 115 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 A0A1B0GX30 115 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 PPYP01298 95 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 ZNF708P17019 499 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 ADCYAP1P18509 176 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 ACKR3P25106 362 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 FUT6P51993 359 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 RAC1P63000 192 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 MRPL49Q13405 166 aaKnown RBP12.21□□□□□ -0.45
SDC2-201ENST00000302190 POC1BQ8TC44 478 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 PTX4Q96A99 478 aa12.21□□□□□ -0.45
SDC2-201ENST00000302190 CHST1O43916 411 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 CTSDP07339 412 aaPredicted RBP12.21□□□□□ -0.46
SDC2-201ENST00000302190 HKR1P10072 659 aa12.21□□□□□ -0.46
SDC2-201ENST00000302190 BAXQ07812 192 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms