RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 GALNT14Q96FL9 552 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 IP6K3Q96PC2 410 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 OR51B6Q9H340 312 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 FOXJ2Q9P0K8 574 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 STARD10Q9Y365 291 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 R4GN57 208 aa11.1□□□□□ -0.63
HIF3A-204ENST00000300862 A0A1B0GV50 99 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 hCG_1809904A0A1W2PP81 198 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 A0A1W2PR64 198 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 A0A1W2PRV1 198 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 NGFP01138 241 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 JMJD7P0C870 316 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 GLP1RP43220 463 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 MAGEA5P43359 124 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 FBXW12Q6X9E4 464 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF561Q8N587 486 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 SLC35G3Q8N808 338 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 OR2M7Q8NG81 312 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 EXTL1Q92935 676 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 C18orf12Q96KH6 178 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 RFNGQ9Y644 331 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 KPTNQ9Y664 436 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 C9orf172C9J069 976 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 PPYP01298 95 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 SCTP09683 121 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 DAOP14920 347 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 PRDX4Q13162 271 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 SPIN3Q5JUX0 258 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 RSRP1Q9BUV0 290 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 IL36GQ9NZH8 169 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 ZNF391Q9UJN7 358 aa11.09□□□□□ -0.63
HIF3A-204ENST00000300862 BOKQ9UMX3 212 aaPredicted RBP11.09□□□□□ -0.63
HIF3A-204ENST00000300862 C7orf77A4D0Y5 90 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 E5RGE8 158 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 H7C1Q1 480 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 TXNL1O43396 289 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 SNRNP70P08621 437 aaKnown RBP11.08□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF14P17017 642 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-204ENST00000300862 ACP1P24666 158 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 LHX2P50458 406 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 NUBP1P53384 320 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 SSTP61278 116 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF616Q08AN1 781 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 LGI3Q8N145 548 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 HSD17B11Q8NBQ5 300 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 LYPD6BQ8NI32 183 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 HPSE2Q8WWQ2 592 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 SPSB4Q96A44 273 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 TAAR9Q96RI9 348 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 SCRT1Q9BWW7 348 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 SUCNR1Q9BXA5 334 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 A0A1W2PNU3 283 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-204ENST00000300862 NXPH3O95157 252 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
HIF3A-204ENST00000300862 NQO2P16083 231 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 GNRHRP30968 328 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 KRBOX4Q5JUW0 171 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 NEK7Q8TDX7 302 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF488Q96MN9 340 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 SYT3Q9BQG1 590 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 C20orf24Q9BUV8 137 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 PRDM14Q9GZV8 571 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF703Q9H7S9 590 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-204ENST00000300862 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
HIF3A-204ENST00000300862 RCL1Q9Y2P8 373 aaKnown RBP11.08□□□□□ -0.64
HIF3A-204ENST00000300862 NKX2-6A6NCS4 301 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 RAB5AP20339 215 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 S100PP25815 95 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 CLDN18P56856 261 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 MIDNQ504T8 468 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ABHD17BQ5VST6 288 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 TMEM211Q6ICI0 200 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 COLCA1Q6ZS62 124 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 MRPL21Q7Z2W9 205 aaKnown RBP11.07□□□□□ -0.64
HIF3A-204ENST00000300862 VASH2Q86V25 355 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ARRDC1-AS1Q9H2J1 176 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF552Q9H707 407 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-204ENST00000300862 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF732B4DXR9 585 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 MPPED1O15442 326 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 LILRA1O75019 489 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 NDUFS6O75380 124 aaKnown RBP11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ITGA3P26006 1051 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 PMELP40967 661 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ZNF565Q8N9K5 539 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 UBAC2Q8NBM4 344 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 MAGT1Q9H0U3 335 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 MTCH1Q9NZJ7 389 aa11.07□□□□□ -0.64
HIF3A-204ENST00000300862 ASPMQ8IZT6 3477 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 IGKV1D-13A0A0B4J2D9 117 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 ST8SIA3O43173 380 aa11.06□□□□□ -0.64
HIF3A-204ENST00000300862 PPIHO43447 177 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms